Gene Rleg_1232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_1232 
SymboluvrC 
ID8012339 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp1205959 
End bp1208001 
Gene Length2043 bp 
Protein Length680 aa 
Translation table11 
GC content63% 
IMG OID644823814 
Productexcinuclease ABC subunit C 
Protein accessionYP_002975064 
Protein GI241203968 
COG category[L] Replication, recombination and repair 
COG ID[COG0322] Nuclease subunit of the excinuclease complex 
TIGRFAM ID[TIGR00194] excinuclease ABC, C subunit 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000101228 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACGGAC GAAAGCTGCC GGATGGCGGC GTTCTCTACG ACGAGACGGA TGAGAGCGAA 
GACGATATCG AAGTGGAAGG CGACGCTTCC GTCGCCGTGC CGCTTGCGGC TGCTGTCGAC
TGGAATGCGG GCAGCCTCAA TGAAACCGGG CTTCTCGGCG CGGAACTGAT CGGCGAATTC
GTCAAGCGGC TGCCGAACAG CCCCGGCGTC TACCGGATGT TCAATGCCGA GGGCGACGTG
CTCTATGTCG GCAAGGCACG CAGCCTGAAG AAGCGCGTCA ACAATTACGC CGTCGGCCGC
GTGCATTCCA ACCGCATCGC CCAGATGGTG CGCCAAACGG CGAACATGGA ATTCGTGACG
ACGCGCACGG AAACCGAAGC GCTGCTCTTG GAAGCGAATC TGATCAAGCG CTTGCGGCCG
CGCTTTAATG TGCTTTTGCG CGACGACAAG TCCTTTCCCT ATATCCTCAT CACCGGCGAC
CACCGGGCGC CGGCGATCTT CAAGCATCGC GGTGCGAGAG CGCGAAAGGG CGACTATTTC
GGGCCCTTCG CTTCGGCCGG CGCGGTCGGG CGGACGATCA ACTCGCTGCA GCGCGCCTTT
CTGATCCGCA CCTGCACCGA CAGCGTCTTC GAAACGCGCA CACGCCCCTG CCTGCTCTAC
CAGATCAAGC GCTGTTCCGG GCCGTGTACC CACGAGGTCA GCGATGGGGG GTACGGCGAA
CTGGTGCAGG AGGCGAAGGA CTTCCTGTCC GGCAAGAGCC AGAAGGTGAA GTCGCATATG
GCCGAGGCGA TGAACCAGGC GGCCGAAGAC CTCGACTTCG AGCGGGCGGC GATCTATCGC
GATCGCCTCG CCGCACTGTC GCATGTGCAG AGCCATCAGG GCATCAATCC GGCCGGCGTC
GAGGAGGCTG ACGTTTTCGC CATCCATCAT GAGGGCGGCA TCTCCTGCAT CCAGGTGTTC
TTCTTCCGCA CCGGCCAGAA CTGGGGTAAC CGCGCCTATT TCCCGAAGGC CGATCCGCAG
CTTTCGAGCG CGGAAGTGCT GAATTCCTTC CTGGCGCAGT TCTACGACGA CAAGCCGGTG
CCGAAGCAGA TCATGCTGTC GCAGACGGTC GAGGAACTGG AGCTGCTCGC CGCAGCACTC
AGCGAAAAGG CCGGCCACAA GGTTTCCATC CTGGTGCCGC AGCGCGGCGA GAAGCGGGAT
CTGGTCGACC ATGTCGTCGG CAATGCGCGC GAGGCGCATG GACGAAAGCT CGCCGAGACG
GCGTCACAGT CGCGGCTGCT CGAAGGTTTC AAGGAAACGT TCGGGCTTGC CTACGCACCG
CAGCGCATCG AGATCTACGA CAACTCGCAT ATCATGGGCA CCAATGCCGT CGGCGGCATG
GTGGTCGCGG GGCCGGAAGG TTTCGTCAAG AACCAGTACC GCAAGTTCAA CATCAAATCG
ACCGACATCA CGCCCGGCGA CGACTTCGGC ATGATGAAGG AGGTGATGTC GCGGCGTTTC
TCGCGGCTGA TCAAGGAGGA CGGCATTCCT GACCGGACGG CGCAGGTGGC CACACCCGAC
GCTGCCGACA TGCCCTTCCC CACGTGGCCC GATGTGATCC TCATCGACGG CGGCCAGGGG
CAGATGACGG CGGTGCGCGC CATCCTTGCC GAACTCGGCA TCACCGACAG CGTGACGGCG
ATCGGCATCG CCAAGGGTGT CGACCGCGAC GCCGGGCGTG AACGCTTCTT CCCGCCGGGA
CGCGAGAGCT TCACGCTGCC GCCGCGCGAT CCGGTGCTCT ACTTCATCCA GCGCATGCGC
GACGAGGCGC ACCGTTTCGC GATCGGCTCG CACCGGGCAC GGCGCAAGAA GGAAATGATC
AAGAACCCGC TCGACGAGAT CGGAGGCATC GGCCCGTCGC GCAAACGCGC GCTGCTTCAG
CATTTCGGCA CGGCAAAGGC GGTTTCGCGC GCCGCCCTGT CCGACCTGAT GGCGGTGGAA
GGCATATCGG AAGCCGTCGC CAAGCAGGTC TATAACCATT TCCATGACGA CGCCGCGAAA
TAA
 
Protein sequence
MNGRKLPDGG VLYDETDESE DDIEVEGDAS VAVPLAAAVD WNAGSLNETG LLGAELIGEF 
VKRLPNSPGV YRMFNAEGDV LYVGKARSLK KRVNNYAVGR VHSNRIAQMV RQTANMEFVT
TRTETEALLL EANLIKRLRP RFNVLLRDDK SFPYILITGD HRAPAIFKHR GARARKGDYF
GPFASAGAVG RTINSLQRAF LIRTCTDSVF ETRTRPCLLY QIKRCSGPCT HEVSDGGYGE
LVQEAKDFLS GKSQKVKSHM AEAMNQAAED LDFERAAIYR DRLAALSHVQ SHQGINPAGV
EEADVFAIHH EGGISCIQVF FFRTGQNWGN RAYFPKADPQ LSSAEVLNSF LAQFYDDKPV
PKQIMLSQTV EELELLAAAL SEKAGHKVSI LVPQRGEKRD LVDHVVGNAR EAHGRKLAET
ASQSRLLEGF KETFGLAYAP QRIEIYDNSH IMGTNAVGGM VVAGPEGFVK NQYRKFNIKS
TDITPGDDFG MMKEVMSRRF SRLIKEDGIP DRTAQVATPD AADMPFPTWP DVILIDGGQG
QMTAVRAILA ELGITDSVTA IGIAKGVDRD AGRERFFPPG RESFTLPPRD PVLYFIQRMR
DEAHRFAIGS HRARRKKEMI KNPLDEIGGI GPSRKRALLQ HFGTAKAVSR AALSDLMAVE
GISEAVAKQV YNHFHDDAAK