Gene Rleg_1226 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_1226 
Symbol 
ID8012333 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp1202685 
End bp1203230 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content64% 
IMG OID644823809 
Productprotein of unknown function DUF1470 
Protein accessionYP_002975059 
Protein GI241203963 
COG category[R] General function prediction only 
COG ID[COG5516] Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.000142417 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCTTTT CCTGGACCCC TCACCGCTTT GCCGGCGGCG CACTGGCGCT CGATGTCGTC 
AACAGCGTCG TTTTGCGCCA CGATGCAGTT CGGCGGATCG ACCGCTTCGC AGTCAGGGAC
CAGATGCAGA GCTTTCCAAA CGCTGCGGCC GAATTCTGCG CCGAACGCGC CCTTTTCGGC
AACATCGCAC CGGTGGCGGC GGAAAACGAA GCGGATTTCA TCGTGCTGCG GGAAGCGATC
GACCTCTATT TCCGCGAGCG TATACTGAAT GGCGGCGACG ACCAATTGCT GGCCAGGCTG
CTGGAAGCGC TGGCGAAGGC GTTGCGCGAC GCAAGCCCCG GCAGCCTGGC CGCGGCAACC
GCCCATTCGG CACTGCGGCT GATCGCTATG CCCGATCCCC AGCGCATGAA GATCTGCGGC
AATTGCGGCT GGCTGTTCAT CGACCGCAGC AAGAACAGAA GCCGGGCCTG GTGCGACATG
GCGGTCTGCG GCAACCGCGC CAAGGCGAAC CGTCACTATC GCCGCAAGAA GGAGGAGACG
CCATGA
 
Protein sequence
MSFSWTPHRF AGGALALDVV NSVVLRHDAV RRIDRFAVRD QMQSFPNAAA EFCAERALFG 
NIAPVAAENE ADFIVLREAI DLYFRERILN GGDDQLLARL LEALAKALRD ASPGSLAAAT
AHSALRLIAM PDPQRMKICG NCGWLFIDRS KNRSRAWCDM AVCGNRAKAN RHYRRKKEET
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