| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_1212 |
|---|
| Symbol | |
|---|
| ID | 8015538 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | - |
|---|
| Start bp | 1188037 |
|---|
| End bp | 1189218 |
|---|
| Gene Length | 1182 bp |
|---|
| Protein Length | 393 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644823795 |
|---|
| Product | permease YjgP/YjgQ family protein |
|---|
| Protein accession | YP_002975045 |
|---|
| Protein GI | 241203949 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0795] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.205645 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.00000154162 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTAC TCGAGACATA CATATTGCGG CGCGTCGGCC AGATGTTTCT CGTGGCGCTC
CTGCCCGTTC TGGCGATCAT TTGGACGACT CAGGTTCTGC AGCGCATCAA TCTGGTTACC
GACAGCGGCC AGTCGATCGG CTCGTTCGCC AAGCTGGCGA CGATGATCCT GCCGTCGATC
ATTCCCGTCG TGCTGCCCTT CGCTCTCGTT ATCGCGATCA CCCAGACGCT GACGACGATG
AACAATGATT CCGAGCTGAC CGTCATCGAT GCGGCCGGGG CGCGGCGCAG CGTGCTGATC
CGTCCGATCC TGCTGCTTGC CGCCGCCATC AGCGTCTTTT CATTCTTCGT CGACAACGTC
GTCGAGCCGC GCGCAAAGAC CGTCGTGCGC CAGATGATCG CCGAGACCTA TGCTGACCTC
CTCTCTTCGG TGATTGAGGA AAAGACCTTC CGCAAGCTCG ATGAAGGCCT GTATGTGCAG
ATCTCGAAGC GGATGGCCGG CCGCATGCTG AAGGGCCTTT TCGTCGCCGA CGAGCGCGAC
CCGGCCTACG AACTGATCTA TTATGCGAAG GAAGGCGCCG TCGACGATAC GGGCACGACG
CTGATCATGC ATGAGGGCGA AGTGCACCGC AAAACGCCCG ATGGCAACGT CTCAGTCATC
AATTTCGATT CCTATTCCTT CGACCTCTCG GACATGACGG AGAATCGCGG TCAGGCGACG
CTGCGCGCCA GCGACCGTGA CCTGTGGTTC CTGATCAATC CGGATCCGGC CGACAAGGAC
TATACGATCC GGCCGCAGAG CTACCGCGCC GAACTGCATC GGCGGCTGAC CGACTGGATC
CTGCCCGTCG TCTTTGCGCT GTTTTCGCTG GCGATCGCCG GCGATGCGCG CTCGCACCGC
GAAGCGCGGC TGCATCCGAT GGTGAGCGCT CTCGCCTATG CCTTCGCGAT GCGATGGGCG
GCCTTCTACG CGGCCAATCA GATCGATACC GACCCTGAAT ATATCGCCGT CCTCTACGCC
ATCCCGATCG TCAGCAGCAT CGTCTCGATC GTCTTCCTCG GCCTGCACAA ACGACTGGTC
ATGCCGTCGT TCATCCGGGA CCGGATTTCG TCCTTCTGGA GAGGGATGCA GGAAAGGCTG
CTTGCCGTGA CCGGCAGGAC CGGCGGGGGC GCTGCCCAAT GA
|
|---|
| Protein sequence | MKLLETYILR RVGQMFLVAL LPVLAIIWTT QVLQRINLVT DSGQSIGSFA KLATMILPSI
IPVVLPFALV IAITQTLTTM NNDSELTVID AAGARRSVLI RPILLLAAAI SVFSFFVDNV
VEPRAKTVVR QMIAETYADL LSSVIEEKTF RKLDEGLYVQ ISKRMAGRML KGLFVADERD
PAYELIYYAK EGAVDDTGTT LIMHEGEVHR KTPDGNVSVI NFDSYSFDLS DMTENRGQAT
LRASDRDLWF LINPDPADKD YTIRPQSYRA ELHRRLTDWI LPVVFALFSL AIAGDARSHR
EARLHPMVSA LAYAFAMRWA AFYAANQIDT DPEYIAVLYA IPIVSSIVSI VFLGLHKRLV
MPSFIRDRIS SFWRGMQERL LAVTGRTGGG AAQ
|
|---|
| |