| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_1208 |
|---|
| Symbol | |
|---|
| ID | 8012316 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | - |
|---|
| Start bp | 1183493 |
|---|
| End bp | 1184437 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644823792 |
|---|
| Product | putative peptidyl-prolyl cis-trans isomerase protein |
|---|
| Protein accession | YP_002975042 |
|---|
| Protein GI | 241203946 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.612075 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.000180052 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGATTGACG CGAAAAAAGC CATAACCAAG TTCCTCGCCG GGGCAGCGCT TGCATTGCTG
ACAGGCTTTG CCGGTTCAGC GCTTGCGGCC AGTGAAGTCA AGGCCGTGGT GAACGGCACG
GCCATCACCA GCGGCGATGT CGCCAAGCGT CAGGCCTTCC TGCGCCTGCA GCATACGAAG
GCCGATGCCA AGGCCGCCGA GGAGCAATTG ATCGACGAGG CGCTCAAGCG GCAGGAAGTC
ACCCGCGTCC ATATGTCGGT TTCGCAGCAG GACGTCGATG CGTCTTTCGC GCGTTTTTCG
AGCGGCAACA AGCTGTCCCC TGAGCAGATG TCGCAGATCC TCGATCGCGC CGGCGTCGGC
GTCGATCATT TCAAGGGTTT CATCGCCGTG CAGATGAGCT GGCCGCGTGT CGTCAACGCC
CGCTACGGCT CGACCTCACG GCTGTCGAAC TATGATCTCG TCTCGCGCAT GATGCAGAAC
AACAAGCAGA AGCCGGTGAC GACGGAATAT ATGCTGCAGC AGGTCATCTT CGTCATTCCG
CAAGCCAAGC GCGGCGCCAT CACCGGCAAG CGCAAGGGCG AGGCCGAGGC GTCGCGCTCC
AAATTTCCGG GCTGCGATCA GGCAAAGGTG TTTGCTGCGA CGATGCGCGA CGTTTCCGTG
CGCGATCTCG GCCGCATGCT CGCCCCCGAG ATCCCGCCGG ATTGGAAGCC GCTGGTCGAG
CAGGCCAAGG GCAACACGAC AGGGACCCGC GTCACCGACA AGGGCGTCGA ATATCTGGCA
ATCTGCAGCC AGCGGCAGGT CTCCGACGAC CAGGCCGCCG AGATGGTTTT CCGCCAGGAA
GATCTCGACA AGTCCAAGGG TGGCAAGGAC GCCAGCCCGG AAAACGAAAA CAGCAAGAAA
TACCTGGATG AACTGCGCAA AAAGGCGCAG ATCGCCTATC GCTGA
|
|---|
| Protein sequence | MIDAKKAITK FLAGAALALL TGFAGSALAA SEVKAVVNGT AITSGDVAKR QAFLRLQHTK
ADAKAAEEQL IDEALKRQEV TRVHMSVSQQ DVDASFARFS SGNKLSPEQM SQILDRAGVG
VDHFKGFIAV QMSWPRVVNA RYGSTSRLSN YDLVSRMMQN NKQKPVTTEY MLQQVIFVIP
QAKRGAITGK RKGEAEASRS KFPGCDQAKV FAATMRDVSV RDLGRMLAPE IPPDWKPLVE
QAKGNTTGTR VTDKGVEYLA ICSQRQVSDD QAAEMVFRQE DLDKSKGGKD ASPENENSKK
YLDELRKKAQ IAYR
|
|---|
| |