| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_1176 |
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| Symbol | |
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| ID | 8012290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012850 |
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| Strand | - |
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| Start bp | 1151693 |
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| End bp | 1153723 |
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| Gene Length | 2031 bp |
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| Protein Length | 676 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644823760 |
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| Product | Peptidoglycan-binding LysM |
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| Protein accession | YP_002975010 |
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| Protein GI | 241203914 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1652] Uncharacterized protein containing LysM domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0861609 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAAGA ACCGTGCCGG CTTGCTGGCT CTTGCAGTCC TCGCAATCGC AATCCTACTG
ATGGTGTTTG TCGTCATGCC GCGTATCGGC GGCGATGCAA CCAAGGTCGG CGACGCCATC
AACCAGGCGA GCACGGAGCT CAAGAACACG GTTAACGAGG CGTCAAAGAC ATCGCGCTCC
GCTGTGGGCG ATGCGGCTGC GGTCGCCGAT CAGGTCGGCC GCCTTTCGGC CGATGCCGGC
GTGTCGCTCA GCGAGCTCAA GGCGCTGTTT GCCGACGGCA AAGGCCCTGC CATCGATGTC
TTCACTGCCG CCAAAACCAA GGCCGTCAAC GCGCTGACCG CACTTGCCGG CTTCACTATT
CCCGAGGGCC TCGATCCCGC GACCCAGACC CTTGCCGCCA AGGCCAAGGA CGGTGGCGCG
AAGGCGCTCG CCATCGTCCG GTCGCTGCCC GAGAACATCG CCGATGCGCT TGCCGCGATC
GCCAAGGCCG AGGTTGCGCT GACCGGTGCG CCGGAGACCG CCCCTGGGGC GAATACGGCA
GCGGAAAATA CCGGCCCGAA ACTTCCCGCC TTCGACGTAT TGCGCGTCGA GCCCGACGGA
TCGACGGTGA TTGCCGGTTC CGCCGAACCG AACGGCAAGC TCGAGGTGCT CGACGGCGAG
AAGGTGGTGA CGACGGCCAA TGTCGATGCG AGTGGCGATT TTGCTGCCGT TCTCGACGAT
CCGCTTCCAG CCGGCGACCA CCAGCTGGTG CTCAAGTTCA CGGGCAAGGA CGGCAAGAGC
ACGCTTTCCG AAGAAGTCGC GACCATTTCC GTGCCGAAGG ATGGCAATGG CGCCAATCTG
CTCGCCATGG TTTCCAAACC CGGCGCGGCG AGCCGCATCA TCACCGCGCC GAAGGCCGGA
ACCGAAGTTG CCGACGCCTC CAATCCGATG GCGCCGCCTG CGGACAAGCC GGCAACCGGT
GAAAGCTCGG CTGCACCAAC CGGCGAGCTG GCGCTGCAGA CGCCGAACCT CACCGACACA
CCCTCCGGCG GCGCTGATAC GGCACCGGCC ATTCCCGGCA CTGCCGCACC GGATAAGACG
AATGCACCCG ACGTGATGGT CAATGCCGTC GAGATCGAAG GCAACAAGAT CTTCATTGCC
GGCACGACGC GCTCCAATGC CAAGGTCATC GGTTATGCCG ACGACAGCCT CGTCGGCCAG
GATACTGCCG GCTCCGACGG CCATTTCGTC ATCGACGGTG TGGTGGCGCT TTCGGTCGGC
GACCACAAGA TCCGCGTCGA TGTCGTCGAT CCCACTGGCA AGGTGATCGT GCGTGCGTCG
GTGAATTTCA ATCGCCCCGC CGGCGATCAG GTGAGGGTCG CCGCGCAATC GGCCCCCGCA
GATGCGAACG GTGCTTCCTC GATGGTTCCG CTTGACGAAG GCGAGCTCCG CAAACTGAAA
GCCGAAGTCG GCAAGGCCTT CGGCCTGCTG AAGGGGCTTT TTGCCGATGG CAAGTTGCCC
GGCGCCGAAC AGCTTGCGGC AGCACGCTCG GCAACGGACT TTGCGCTGCG CTCCGTCGCA
GACTTCCGTC CAGCGGCCGA TGCGCCTGAT GTCTTCAAGC AAGCGTCAGG TTCCTCCTCA
CAGGTCGCCG GCAATGCGCT GAAGCTGCTG CAGGGCCTGC CTGGGGATGC GAAGTCGGTC
GGCGCCGCAC TCGACAAGCT GGGCGGGATG ATTGCCGAGC TCACCGCCGC ACCCGCGCCG
GCAACGCCGT CTGCAAACGA GGTCGGAAGC AACCAGCCGA AGACGATCGA ACAGGCGCCG
CTGACGGCGA ACAACGCGGC GGTCATCATT CGCCGCGGCG ACACGCTTTG GCAGATCTCG
CGCCGTACCT ATGGTCTCGG CGTTCGCTAC ACGACGATCT ACATCGCCAA CGAGGACAAG
ATCATCAATC CCGATCGCAT CCGCCCTGGC CAGATTTTCG GCCTGCCGAA GGATGTACTG
CCGAATGCCG AAGAGCTGCA CCGCAAGCGC ATGTCCGGCC AGCATCTCTA A
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| Protein sequence | MMKNRAGLLA LAVLAIAILL MVFVVMPRIG GDATKVGDAI NQASTELKNT VNEASKTSRS
AVGDAAAVAD QVGRLSADAG VSLSELKALF ADGKGPAIDV FTAAKTKAVN ALTALAGFTI
PEGLDPATQT LAAKAKDGGA KALAIVRSLP ENIADALAAI AKAEVALTGA PETAPGANTA
AENTGPKLPA FDVLRVEPDG STVIAGSAEP NGKLEVLDGE KVVTTANVDA SGDFAAVLDD
PLPAGDHQLV LKFTGKDGKS TLSEEVATIS VPKDGNGANL LAMVSKPGAA SRIITAPKAG
TEVADASNPM APPADKPATG ESSAAPTGEL ALQTPNLTDT PSGGADTAPA IPGTAAPDKT
NAPDVMVNAV EIEGNKIFIA GTTRSNAKVI GYADDSLVGQ DTAGSDGHFV IDGVVALSVG
DHKIRVDVVD PTGKVIVRAS VNFNRPAGDQ VRVAAQSAPA DANGASSMVP LDEGELRKLK
AEVGKAFGLL KGLFADGKLP GAEQLAAARS ATDFALRSVA DFRPAADAPD VFKQASGSSS
QVAGNALKLL QGLPGDAKSV GAALDKLGGM IAELTAAPAP ATPSANEVGS NQPKTIEQAP
LTANNAAVII RRGDTLWQIS RRTYGLGVRY TTIYIANEDK IINPDRIRPG QIFGLPKDVL
PNAEELHRKR MSGQHL
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