Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_1175 |
Symbol | |
ID | 8012289 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | - |
Start bp | 1149603 |
End bp | 1151480 |
Gene Length | 1878 bp |
Protein Length | 625 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644823759 |
Product | ABC transporter related |
Protein accession | YP_002975009 |
Protein GI | 241203913 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG5265] ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.27233 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCAAACG GCAAGACAGT CTCGGAATCC AACCTGCCGC AGACGCTTCT CAACCTCTGG CCCTATATGT GGCCGGCCGG CCGGCCCGAC CTCAAGATGC GCGTCGTCTG GGCTTCGGTC TTTCTGCTGA TCTCCAAGTT CGTACTGTTG CTCGTTCCCT ATTTCTTCAA ATGGTCGACC GATGCGCTGA ACGGCAGGAT GGATCTTGCC GGCTCGGTGC CGCCGCTGCT GGCCGGCGCC ATCGCGCTTG TCATCGCCTA TAGCATCACC CGGCTGATCC AGCTCGGCCT CAATCAGCTG CGCGACGCGC TCTTTGCCAG CGTCGGACAA CATGCGGTGC GCCAGCTCGC CTACAGGACC TTCGTGCACA TGCACGAGCT GTCGCTGCGC TTCCATCTGG AGCGCAAGAC CGGCGGGCTG TCGCGCATCA TCGAGCGCGG CACCAAGGGC ATCGAGACGA TCGTGCGCTT CACGATCCTC AATTCGGTCC CGACCGTCAT CGAATTCCTG CTGACGGCAG TGATCTTCTG GTGGGGCTAC GGCTTCTCCT ATCTCGCCGT TACCGCCTTT ACCGTCTGGG CCTATATCTG GTTCACGATC CGCGCATCCG ACTGGCGCAT CGCCATCCGC CGGTCGATGA ACGATAGCGA TACCGACGCC AATACCAAGG CGATCGACTC GCTCCTCAAT TTCGAGACCG TCAAATATTT CGGCAATGAA GAGATGGAGG CCAAGCGCTT CGACAAATCG ATGGAACGCT ACGAGAAGGC GGCAACCGAT GTCTGGACCT CGCTCGGCTG GCTGAACTTC GGCCAGGGCG TCATCTTCGG CATCGGCACG ACCATCATGC TGGTGCTGTC GGCGCTGGCC GTGCAGCGCG GCGAGCAGAC GGTCGGCGAT TTCGTTTTCG TCAATTCGAT GCTGCTGCAG CTTTCCGTAC CGCTCAACTT CATCGGCTTC GTCTACCGGG AAATTCGCCA GGGGCTGACC GATATCGAGC AGATGTTCGA TTTGCTTGAG GTGCAGACCG AAGTCAAAGA CGCGCCCGAT GCGACCGAAC TTCGGATCGG CCAGGGCGCG ATCTCCTTCA AGGACGTGCA TTTCGCCTAC GACGCGGCCC GTCCGATCCT GAAGGGCATT TCCTTCGAGG TGCCGGCCGG CAAGACGGTC GCCGTCGTCG GTCCGTCGGG TGCGGGCAAA TCGACGCTGT CGCGCCTGCT CTATCGTTTC TACGATATCC AGAGCGGCGC GATCACCGTC GACGGCCAGG ATATCCGCAA GGTGACGCAG AAGAGTCTGC GTACGGCGAT CGGCATGGTG CCGCAGGATA CAGTGCTCTT CAACGACACG GTCGCCTACA ACATCCGCTA CGGCCGCACA TCGGCCAGCG ACGGCGAGGT CTTTGCAGCG GCCGAGGTGG CGCAGATCGC ACATTTCATC GAAACGCTGC CCGAGGGTTT CGAAACCAAG GTTGGCGAGC GCGGGCTGAA GCTTTCGGGC GGCGAGAAGC AGCGGGTGGC GATCGCCCGC ACCATCCTCA AGGCGCCACC GATCCTGATC CTCGACGAGG CGACGTCGGC GCTCGACACG ACGACGGAAC GAGAAATCCA GGAAGCGCTC GACCTGGTTT CGAAGAACCG CACGACGCTT GTTATCGCCC ACCGGCTTTC GACTGTCATC AGCGCCGATG AAATCATCGT GCTCAAAAGC GGCGAGATCG CCGAGCGCGG AACACATGCA GCCCTGCTCG AAAGGAACGG CCTTTATGCC TCGATGTGGA ACCGCCAGCG CGAGGCGACA CAGGCGGAGG AACATCTGAA GCAGGTGCGC GAAAGCGACG ACCTCGGCGT GATAACACGA CTTGCTCCGG CAAGCTGA
|
Protein sequence | MANGKTVSES NLPQTLLNLW PYMWPAGRPD LKMRVVWASV FLLISKFVLL LVPYFFKWST DALNGRMDLA GSVPPLLAGA IALVIAYSIT RLIQLGLNQL RDALFASVGQ HAVRQLAYRT FVHMHELSLR FHLERKTGGL SRIIERGTKG IETIVRFTIL NSVPTVIEFL LTAVIFWWGY GFSYLAVTAF TVWAYIWFTI RASDWRIAIR RSMNDSDTDA NTKAIDSLLN FETVKYFGNE EMEAKRFDKS MERYEKAATD VWTSLGWLNF GQGVIFGIGT TIMLVLSALA VQRGEQTVGD FVFVNSMLLQ LSVPLNFIGF VYREIRQGLT DIEQMFDLLE VQTEVKDAPD ATELRIGQGA ISFKDVHFAY DAARPILKGI SFEVPAGKTV AVVGPSGAGK STLSRLLYRF YDIQSGAITV DGQDIRKVTQ KSLRTAIGMV PQDTVLFNDT VAYNIRYGRT SASDGEVFAA AEVAQIAHFI ETLPEGFETK VGERGLKLSG GEKQRVAIAR TILKAPPILI LDEATSALDT TTEREIQEAL DLVSKNRTTL VIAHRLSTVI SADEIIVLKS GEIAERGTHA ALLERNGLYA SMWNRQREAT QAEEHLKQVR ESDDLGVITR LAPAS
|
| |