| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_1159 |
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| Symbol | |
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| ID | 8015529 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012850 |
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| Strand | - |
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| Start bp | 1137472 |
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| End bp | 1139373 |
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| Gene Length | 1902 bp |
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| Protein Length | 633 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644823743 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_002974993 |
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| Protein GI | 241203897 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.517596 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCTG AAGCGCTCTT CTGGCGGCAA TGTACCGAGG CAGTCACCGC CGATGGATCG
ATCGATGCGC AGCGCCTGAT GGATCTTGTG ATCGCGACCT ATCGCGTCCA TGAAAGCGAC
TATGACGAAA TCGAGAGAAG CGCGGAAACG CTGCTAAGGG AAAACCATGC GCTGAGAGGC
AATATTTCCG CCCTCAGCAA AGCGTTCGAC GGACAGAAAG AGCTCTTCGA AATCATCCTC
AACAACCTGC CGCTCGGTCT CAGCGTCTTC GACTCCGACC AGCGGCTGAC GCTTTCCAAC
ACCCGCTTCC GCCAGCTCTT CGACCTGACG GACGAAGATG TCATTGCCGG CGCGACAATC
GCCGATCTCA CGGCCAAAAT GCGCGGCACG GAGAGCGCCA GCGCCAAGCC CGGCCGGCGG
ACCGGGCGAC ATTCCTCCGC AACCGCAAGG AGCAGTAGTC TCCGTCGGCG CGAATGGTTG
ATGGACGATG GCCGCATCAT CCAGAGCATG GTGACTATCC TTTCCGACGG CAGCAACATT
TCCATTCATG CCGATATTAC CGAGGATCGA AGGGCGGCCG AGCGCATCAC CTATCTCGCC
CACCACGACC CGCTGACCGG CCTTCCGAAT CGCATCCATT TCCGCGAGCA GGTGGATGCG
ACGCTCACAG AGCGCAGGCC AGATCAGCAG ATTGCCCTCG TTCACCTCAA TCTCGACCGG
TTCAAATCGA TCAACAACAC GATGGGCGTT TCGGCCGGCG ACAAGATCCT GCTGCAGGTC
GCCGAGCGCA TCCGAGCCTC GGCCGGTTCG GAAAACACCC TGGCGCGCCT CGGCTCGGAC
GAATTCGCCA TCCTGCAGAC GGGCAGGCAG CAGCCCCGGA ACGTGACGGC GCTTGCCGAG
CGGATCCGCC GGGAGCTTTC CAAACCATTC CTCCACGGCG AAAAACAGGT GGAGCTCAGC
GTCTCCATGG GCATCGCAAT CGCCCCTGAG GATGGCGAGG AAACCGATAT CCTGTTGAAA
AATGCCGGCG TGGCGCTGTC ACATGCCAAG GCGGACGGCC GCAAACGCGA ACGTTTCTTC
GCCAGCGAGA TGGAAGCGCA GATCCAGCTG CGCCACGCGC TGGAGGCGGA CCTCAGAGCA
GCCGTTGAGA ATGAAGAATT CGAGCTGCAC TACCAGCCGC TTTATGACCT CGTGCAGCGG
CGCATCTGTG GCTTCGAAGC GTTGATCCGT TGGAACCACC CGGCTCGAGG CCGCGTTCCG
CCGATGGATT TTATTCCGCT TGCCGAAGAG GTGGGCCTTG TCGTTGATAT CGGCCGTTGG
GTTTTGCACC GGGCCTGCAA CGATGCAGCG CAATGGCCGG AGGGCATCAA GATCGCCGTC
AACGTTTCGG CAATCCAATT CAGCAGCAGC GACCTGACGC GAGATGTCAG CGAGGCGCTT
GCCGCCGCGG CGCTGTTGCC GTCGCGGCTT GAACTCGAAA TCACCGAGAG CGTGCTGATG
GAAAATCTAA GCGACGTGCT GCCGATCCTG CATGCGCTGA AGGAGCGCGG CATCCGCATC
TCGATGGACG ATTTCGGAAC CGGCTATTCC TCACTGAGCT ATCTCTCGAG CTTCCCCTTC
GACAAGATCA AGATCGACAA GTCCTTCGTC AACGACATCG TCGACAACAA GGAAGCGCAT
GCGATCATGC ACGCGATCAT CCTGCTCGGC GATGCGCTCG GCATGCGCGT CACCGTCGAG
GGCGTCGAAA CGGCCGCGCA GCTGGCGCTG CTCGAATGCG AGGAGTGCGA CGAGATCCAA
GGCTATCACA TCAGTCCGCC GCGACCGGCG CGTGACGTGC CCCATCTTCT CTCCCTGCCG
CCGAACGGCG GCGTGACGCA TCTTCCTGAA GCCAAGCACT GA
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| Protein sequence | MKAEALFWRQ CTEAVTADGS IDAQRLMDLV IATYRVHESD YDEIERSAET LLRENHALRG
NISALSKAFD GQKELFEIIL NNLPLGLSVF DSDQRLTLSN TRFRQLFDLT DEDVIAGATI
ADLTAKMRGT ESASAKPGRR TGRHSSATAR SSSLRRREWL MDDGRIIQSM VTILSDGSNI
SIHADITEDR RAAERITYLA HHDPLTGLPN RIHFREQVDA TLTERRPDQQ IALVHLNLDR
FKSINNTMGV SAGDKILLQV AERIRASAGS ENTLARLGSD EFAILQTGRQ QPRNVTALAE
RIRRELSKPF LHGEKQVELS VSMGIAIAPE DGEETDILLK NAGVALSHAK ADGRKRERFF
ASEMEAQIQL RHALEADLRA AVENEEFELH YQPLYDLVQR RICGFEALIR WNHPARGRVP
PMDFIPLAEE VGLVVDIGRW VLHRACNDAA QWPEGIKIAV NVSAIQFSSS DLTRDVSEAL
AAAALLPSRL ELEITESVLM ENLSDVLPIL HALKERGIRI SMDDFGTGYS SLSYLSSFPF
DKIKIDKSFV NDIVDNKEAH AIMHAIILLG DALGMRVTVE GVETAAQLAL LECEECDEIQ
GYHISPPRPA RDVPHLLSLP PNGGVTHLPE AKH
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