Gene Rleg_1146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_1146 
Symbol 
ID8012264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp1125817 
End bp1128051 
Gene Length2235 bp 
Protein Length744 aa 
Translation table11 
GC content62% 
IMG OID644823730 
Product(p)ppGpp synthetase I, SpoT/RelA 
Protein accessionYP_002974980 
Protein GI241203884 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases 
TIGRFAM ID[TIGR00691] (p)ppGpp synthetase, RelA/SpoT family 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCGGC AGTACGAGCT CGTGGAGCGG GTTCAGCAAT ACAAGCCCGA TGCCAATGAA 
GCACTGCTGA ACAAGGCCTA TGTTTATGCC ATGCAGAAAC ATGGCCAGCA AAAGCGCGCG
AGCGGCGATC CCTATATTTC CCATCCGCTC GAGGTCGCCG CCATCCTCAC CGACATGCAC
CTCGATGAAT CGACGATCGC GGTCGCTCTG CTGCACGATA CCATCGAGGA CACGACGGCG
ACGCGCGCCG AAATCGATGA ACTCTTCGGC GAGGATATCG GCCGCCTGGT CGAGGGTCTG
ACCAAGATCA AGAAGCTCGA TCTCGTCACC AAAAAGGCCA AGCAGGCGGA AAACCTGCGC
AAGCTGCTGC TCGCCATTTC CGACGATGTG CGCGTGCTGC TCGTCAAGCT TGCCGACCGC
CTGCACAATA TGCGCACCCT CGATCACATG TCGGCCGACA AGCGTGCCCG CATCTCCGAG
GAGACGATGG AAATCTATGC GCCGCTCGCT GGCCGCATGG GCATGCAGGA CATGCGCGAG
GAACTCGAAG AGCTCTCCTT CCGGCATATG AACCCGGAAG CCTACGAGAC CGTCACCAAA
AGGCTGGAAG AGCTTTCGAA GCGCAACGAG GGCATCGTCA AGAAGATCGA GGCCGAGCTG
CGCGACCTTT TGGTCGCAAG CGGCCTGACG AGCGCCTACG TCAAGGGCCG GCAGAAGAAG
CCCTATTCGG TCTTCCGCAA GATGCAGTCG AAGTCGCTTT CCTTCGAGCA GCTTTCCGAT
GTCTACGGCT TCCGCCTGAT CGTCGAGGAT ATCCCTTCCT GTTATCGGGC GCTCGGCATC
GTCCACACGC GCTGGCGCGT CGTGCCCGGC CGCTTCAAGG ACTATATCTC GACGCCGAAG
CAGAACGATT ACCGTTCGCT GCACACCACC ATCGTCGGTC CTTCCAGCCA GCGCATCGAA
CTGCAGATCC GCACCAAGCG CATGCACGAA ATCGCCGAAT TCGGCATCGC CGCCCACACG
CTCTATAAGG ACGGCGCCAC CAATGCCGAT GGCGACATCC TTTCTCGCGA ATCCAATGCC
TATTCCTGGC TGCGCCATAC GATCGAGGCG CTGGCCGAGG GCGACAGCCC GGAAGAATTC
CTCGAGCACA CCAAGCTCGA GCTGTTCCAG GACCAGGTCT TCTGCTTCAC GCCGAAGGGC
AAGCTGATTG CCTTGCCGCG TGGCGCCACC CCGATCGATT TCGCCTATGC GGTGCACACC
AATATCGGCG ATACCACGGT GGGCGCCAAG ATCAACGGCC GCATCATGCC GCTGGTGACG
CGGCTTGCGA ATGGCGACGA GGTCGAGATC ATCCGCTCCG GCGTGCAGGT TCCGCCGGCC
GCCTGGGAGG AGATCGTCGT GACCGGCAAG GCGCGCGCCG CCATCCGTCG CGCCACCCGC
ATGGCGATCC GCAAGCAATA TGCCGGCCTC GGCCACCGCA TTCTCGAGCG CACCTTCAAC
AGGGCCGGCA AGATTTTCTC GCGCGAGGCG ATGAAGCCGG CGCTGCACCG TCTCGGCCAG
AAGGATGTCG AGGATGCGAT CGCCGCTGTC GGCCGCGGCG AAATGTCTTC GCTCGACGTG
CTGCGCGCCG TCTATCCTGA TCATCAGGAC GAGCGCGTCA CCGTGAAGCC CTCCGGCGAT
GACGGCTGGT TCAACGTCCG CAGCGCCGCC GGCATGATCT TCAAGATCCC CGGCAAGACC
AAGGCAGGGC ACGACGGCGG CCATTCGGAA ATCGACGCCG ATGCCGATAT CGGGCCGATC
CGCGGCCTGT CCGGCAATGT CGACGTCAAG TTCGCGCCGA CCGGTGCCGT GCCCGGCGAT
CGCATCGTCG GCATCATGGA CCAGGGCAAG GGCATCACCA TCTATCCGAT CCAGTCGCCG
AGCCTGCAGC GCTTCGACGA TCAGCCCGAC CGCTGGATCG ACGTCCGCTG GGATCTCGAC
GAAGCCAATA AGTCGCGTTT CATGGCGCGC ATCATGGTGA ATGGGCTGAA TGAACCCGGC
ACGCTTGCCA AGGTCGCCCA GACGGTGGCA GGCATCGACG TCAATATCCG CTTGCTGAAC
ACGGTGCGGG TGGCGGCCGA TTTCACCGAA ATGATGCTCG AGGTCGAGGT CTGGGACCTG
CGTCAGCTCA ACCAGCTGCT CGCCCAGATG AAGGAACTGG ATTGCATCGC CACGGTCCGG
CGGCTCTACG AGTAA
 
Protein sequence
MMRQYELVER VQQYKPDANE ALLNKAYVYA MQKHGQQKRA SGDPYISHPL EVAAILTDMH 
LDESTIAVAL LHDTIEDTTA TRAEIDELFG EDIGRLVEGL TKIKKLDLVT KKAKQAENLR
KLLLAISDDV RVLLVKLADR LHNMRTLDHM SADKRARISE ETMEIYAPLA GRMGMQDMRE
ELEELSFRHM NPEAYETVTK RLEELSKRNE GIVKKIEAEL RDLLVASGLT SAYVKGRQKK
PYSVFRKMQS KSLSFEQLSD VYGFRLIVED IPSCYRALGI VHTRWRVVPG RFKDYISTPK
QNDYRSLHTT IVGPSSQRIE LQIRTKRMHE IAEFGIAAHT LYKDGATNAD GDILSRESNA
YSWLRHTIEA LAEGDSPEEF LEHTKLELFQ DQVFCFTPKG KLIALPRGAT PIDFAYAVHT
NIGDTTVGAK INGRIMPLVT RLANGDEVEI IRSGVQVPPA AWEEIVVTGK ARAAIRRATR
MAIRKQYAGL GHRILERTFN RAGKIFSREA MKPALHRLGQ KDVEDAIAAV GRGEMSSLDV
LRAVYPDHQD ERVTVKPSGD DGWFNVRSAA GMIFKIPGKT KAGHDGGHSE IDADADIGPI
RGLSGNVDVK FAPTGAVPGD RIVGIMDQGK GITIYPIQSP SLQRFDDQPD RWIDVRWDLD
EANKSRFMAR IMVNGLNEPG TLAKVAQTVA GIDVNIRLLN TVRVAADFTE MMLEVEVWDL
RQLNQLLAQM KELDCIATVR RLYE