Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_1136 |
Symbol | |
ID | 8015526 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | - |
Start bp | 1114014 |
End bp | 1114889 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644823719 |
Product | transcriptional regulator, RpiR family |
Protein accession | YP_002974970 |
Protein GI | 241203874 |
COG category | [K] Transcription |
COG ID | [COG1737] Transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.902832 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATAACG ATCCCCAGAG GCACGCGCGT GTACCGCGCG ATTTCGAAAG CCTGCGCAGC ACCATCATCG AGCGCAAGGC AAGCATGCCG AAGCGGCTGG CACAGGTCGC CGCCTTCGCG CTCGGCAATC CCGATGAGAT CGCCTTCGGC ACGACGGCGA GCATCGCGGC GGCCTCCGAC GTCCAACCCT CGACGCTGGT GCGCTTGGCG CATCATCTGG GCTATGGAGG CTTTTCCGAC CTGCAGAGCA TCTTTCGCGA AAGATTGCGG GACCGGACGC TGAGCTACGA AGAGCGCCTC GTCACGCTGG AGCAATCGAG CGGCGACGAT GAGGACGCCA ATCTGCTCTC CGGCTTCATT GCCGCGGCAA ATCAGTCGGT CAACCGGCTG GCCGCAACGG TGCAGAGCGA TACTTTCACC AAAGCGGTGA ATATCCTTGC CAACGCCGAG ACGATCTACC TGATCGCCAA ACGGCGCTCC TACCCGCTGA CGGCGCACAT GACCTACGCT TTTTCTAAGC TCAACATCCG CCACCAGATC GTCGCCTCGC CGAACGGCGT CGACCCTGAA ATGGTGCAGT TCGCAACACC GAAGGATGCA GCGATCGCGG CGAGCTTCTC GCCCTATGCG GCCGACAGCC TCAGCCAGAG CCAGGAGCTT GCCGATCGCG GCGTCCCCGT CATTGCGATC ACCGATTCGG CCTTCTCGCC GCTTGCCGCC TGCGCCACGC ACTGGTTCGA GGTGGCGGAG GCCGATTTCG CCGGCTTCCG CTCGCTTTCG GCCTCGATGG CGCTCACCAT GGCATTACCG GTTGCAATCG CTGAACGGCG GCGCAAGGGT CAGCCGTCAA AACCTGTAAA AGGCAAAATG GAATAA
|
Protein sequence | MDNDPQRHAR VPRDFESLRS TIIERKASMP KRLAQVAAFA LGNPDEIAFG TTASIAAASD VQPSTLVRLA HHLGYGGFSD LQSIFRERLR DRTLSYEERL VTLEQSSGDD EDANLLSGFI AAANQSVNRL AATVQSDTFT KAVNILANAE TIYLIAKRRS YPLTAHMTYA FSKLNIRHQI VASPNGVDPE MVQFATPKDA AIAASFSPYA ADSLSQSQEL ADRGVPVIAI TDSAFSPLAA CATHWFEVAE ADFAGFRSLS ASMALTMALP VAIAERRRKG QPSKPVKGKM E
|
| |