| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_1044 |
|---|
| Symbol | groEL |
|---|
| ID | 8012173 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | + |
|---|
| Start bp | 1019810 |
|---|
| End bp | 1021444 |
|---|
| Gene Length | 1635 bp |
|---|
| Protein Length | 544 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644823627 |
|---|
| Product | chaperonin GroEL |
|---|
| Protein accession | YP_002974878 |
|---|
| Protein GI | 241203782 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
|---|
| TIGRFAM ID | [TIGR02348] chaperonin GroL |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGCCA AGGAAATCAG GTTCTCCACC GACGCGCGCG ACCGCCTGCT GCGCGGCGTC
GAATTGCTCA ACAACGCCGT CAAGGTGACG CTTGGCCCGA AGGGTCGCAA CGTTGTCATC
GACAAGGCCT ATGGCGCGCC GCGCATTACC AAGGACGGCG TTAGCGTCGC CAAGGAGATC
GAGCTCGCGG ACAAGTTCGA GAACATGGGC GCGCAAATGG TGCGTGAAGT GGCTTCGAAG
ACCAATGATC TTGCCGGCGA CGGCACGACG ACGGCAACCG TTCTCGCCGC CTCCATCTTC
CGCGAAGGCG CCAAGCTCGT CGCTGCCGGC ATGAACCCTA TGGATCTCAG GCGCGGCATC
GATCTCGGCG TTACCGCCGT CGTCAAGGAA ATCAAGGCGC GGGCGATGAA GGTCAAATCG
TCAGGTGAGA TCGCCCAAGT CGGCACCATT GCCGCCAATG GCGACGCCGC CATCGGTGAG
ATGATCGCCA AGGCGATGGA CAAGGTCGGC AATGAGGGCG TCATAACGGT CGAAGAGGCG
CGAACCGCCG AGACCGAACT CGACGTCGTC GAGGGTATGC AGTTCGACCG CGGCTATCTC
TCACCCTATT TCGTCACCAA TGCCGAGAAG ATGCGCGTGG AACTGGAGGA TCCCTATATC
CTCGTTCACG AGAAGAAACT CGGCAGCCTG CAGGCGATGC TGCCGATCCT GGAAGCCGTC
GTACAGACCG GCAAACCGCT TCTGCTCATC TCGGAGGACG TCGAAGGCGA GGCCTTGGCG
ACGCTTGTTG TCAACAAGCT GCGCGGCGGC CTGAAGGTCG CAGCCGTCAA GGCGCCGGGT
TTCGGCGATC GCCGTAAGGC GATGCTCGAA GACATTGCCG TGCTTACATC AGGCCAGATG
ATTTCCGAGG ATCTCGGTAT CAAGCTCGAC AACGTCACGC TCGATATGCT CGGCCGCGCC
AAGCGCGTGC TGATCGACAA GGAGAGCACC ACGATCATCG ACGGCTCCGG CGAGAAAGCG
GCCATCCAGG CGCGCATCCA GCAGATCAAG GCGCAGATCG AGGAGACCAC CTCCGATTAC
GATAAGGAAA AGCTGCAGGA GCGCCTGGCG AAACTCGCCG GCGGCGTCGC GGTCATCCGT
GTCGGCGGCG CCACCGAGAC GGAAGTCAAG GAAAAGAAGG ACCGCATCGA CGATGCACTG
AACGCCACCC GTGCGGCGGT CGAAGAGGGC ATCGTGCCCG GCGGCGGCGT GGCACTGTTG
CGCGCCAAGT CGGCGCTGAC GGGGCTGACC GGGGAGAACG CCGACGTGAC GGCGGGCATC
TCGATCGTGC TCAGGGCGCT CGAAGCCCCG ATCCGGCAGA TCGCCGACAA TGCCGGGTTC
GAGGGCTCCA TCGTCGTTGG AAAACTCGCC GGCAGCAATA ATCACAATCA GGGCTTCGAC
GCACAGACGG AGACCTATGT CGATATGATC GAGGCCGGCA TCGTCGATCC CGCCAAGGTC
GTGCGCACCG CTCTGCAGGA CGCCGGCTCG ATTGCGGCGC TGCTGATCAC CGCCGAGGTG
ATGATCGCCG ACATTCCCGC AAGAGACTCC GCCCCTGCAG CCGGAAATGG CGGCATGGGA
GATATGGGAT ACTGA
|
|---|
| Protein sequence | MSAKEIRFST DARDRLLRGV ELLNNAVKVT LGPKGRNVVI DKAYGAPRIT KDGVSVAKEI
ELADKFENMG AQMVREVASK TNDLAGDGTT TATVLAASIF REGAKLVAAG MNPMDLRRGI
DLGVTAVVKE IKARAMKVKS SGEIAQVGTI AANGDAAIGE MIAKAMDKVG NEGVITVEEA
RTAETELDVV EGMQFDRGYL SPYFVTNAEK MRVELEDPYI LVHEKKLGSL QAMLPILEAV
VQTGKPLLLI SEDVEGEALA TLVVNKLRGG LKVAAVKAPG FGDRRKAMLE DIAVLTSGQM
ISEDLGIKLD NVTLDMLGRA KRVLIDKEST TIIDGSGEKA AIQARIQQIK AQIEETTSDY
DKEKLQERLA KLAGGVAVIR VGGATETEVK EKKDRIDDAL NATRAAVEEG IVPGGGVALL
RAKSALTGLT GENADVTAGI SIVLRALEAP IRQIADNAGF EGSIVVGKLA GSNNHNQGFD
AQTETYVDMI EAGIVDPAKV VRTALQDAGS IAALLITAEV MIADIPARDS APAAGNGGMG
DMGY
|
|---|
| |