| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_1038 |
|---|
| Symbol | |
|---|
| ID | 8012168 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | - |
|---|
| Start bp | 1016873 |
|---|
| End bp | 1017715 |
|---|
| Gene Length | 843 bp |
|---|
| Protein Length | 280 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 644823621 |
|---|
| Product | transglutaminase domain protein |
|---|
| Protein accession | YP_002974872 |
|---|
| Protein GI | 241203776 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.149694 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGATCC GTTACGGCTA TGAAATGACG CTGACCTGCC CGCAGCCGAC CGCATTGGTC
TGTCTGCTGT CGGTTCATGA CGATCGCGCG GCCGACATCA GAATTCCGGA AACGGTCTTC
ACCACGCCCG ATGTCCCCAC TTCTTCCTAT CGCGATCTCT TCGGCAACCG CTGTCTTCGG
CTGGTTGCGC CAGCGGGCGA CCTGACCATA TGGGGCGATG CGACGATCGA AGACGACGGC
AAACTGGACA GGTCGCTGCC AGGCGCCAGG GAAGTCCCGG TTTCGGAGTT GCCGGATGAT
TGCCTCGTCT ACCTGATGGG CAGCCGCTAT TGCGAGACGG ATCGTCTCAG TCAAATTGCA
TGGGATATGT TCGGCACCGT CTCACCCGGC TGGGGCCGCG TTCAGGCGAT CTGCGACTTC
GTTCACGGCC ATATCCAATT CGACTACATG CAGGCGCGAT CGACGCGGAC AGCCTTCGAG
GCGTTCCACG AACGTGTCGG CGTCTGTCGC GACTTTGCGC ATCTCGCGGT GGCGCTGTGC
CGTTGCCTCA ACATTCCTGC CCGATATATC AATGGCCATC TCGGTGACAT CGGTATTCCC
GTCGTCGATC CGATGGACTT CAGCGCCTGG ATCGAGGTCT TCCTGGACGG TGCATGGCAT
ACATTTGATC CGCGCAACAA CACGCCGCGG ATCGGTCGTA TCATCGTCGC ACGCGGGCGC
GACGCCGCCG ACATACCGCT CATCAATTCC TTCGGACCGC ATGTGCTGAA GGCGTTTCGA
GTCTGGACCT ATGAGGTGAC GAACGTGGAG CCGATGCAAA ACGTCGCCGA GGAAGCTGTT
TAG
|
|---|
| Protein sequence | MLIRYGYEMT LTCPQPTALV CLLSVHDDRA ADIRIPETVF TTPDVPTSSY RDLFGNRCLR
LVAPAGDLTI WGDATIEDDG KLDRSLPGAR EVPVSELPDD CLVYLMGSRY CETDRLSQIA
WDMFGTVSPG WGRVQAICDF VHGHIQFDYM QARSTRTAFE AFHERVGVCR DFAHLAVALC
RCLNIPARYI NGHLGDIGIP VVDPMDFSAW IEVFLDGAWH TFDPRNNTPR IGRIIVARGR
DAADIPLINS FGPHVLKAFR VWTYEVTNVE PMQNVAEEAV
|
|---|
| |