Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_1022 |
Symbol | |
ID | 8015512 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | - |
Start bp | 1004088 |
End bp | 1006298 |
Gene Length | 2211 bp |
Protein Length | 736 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644823605 |
Product | penicillin-binding protein, 1A family |
Protein accession | YP_002974856 |
Protein GI | 241203760 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.53642 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCAGGATC CGGACAACCC AGGAAATGGG CCAGGAAATG GGCCAGAAAA CGGGCCAGAA AAAAGGCCCG GAAAAGCGGC GAGCGAGGCA GCGGAAAAGC GGCCGGCGAA GAGCCGTCAC ATTCTACTGC GCATCGATTC CTGGATCGAT TCGACCGTCT GGAACGCCGG CTTCCGCGCT GCCGAGATCT GGGAAGACAT TACCATTTTC TTCCGCCGCT TCCGCGTGCG CGGCTGGAAG CGCATGGTCT TCGAACTCGC CGGCGAAGGG CTGACGCTCG GGACGGCCGG CTCGGTGCTG ATGCTGCTGC TTGCCCAGCC CGCCTTCGAG GCAACCAAGG AAGACTGGCG CAACCGCGGC GATTTCGCCG TCACCTTCAC TGACCGCTAC GGCAACGTCA TCGGCCATCG CGGCGTCATC CACCAGAATT CCGTACCGAT CGACGAGCTG CCGGATTCGC TGATCAAATC GGTGATCGCC ACCGAGGACC GGCGCTTCTT CGACCATTTC GGCATCGATT TCATCGGCCT CTTCCGCGCC ATGAGCGAGA ATGCGCGCGC GGGCGAAGTC GTCCAAGGCG GCTCGACACT GACGCAGCAG CTCGCCAAGA ACCTGTTCCT GTCGAACGAA CGCTCGATCG ACCGCAAGGT CACCGAGGCG TTCCTGGCAC TGTGGCTCGA GGCGAACCTT TCCAAGAAGG AAATCCTCTC CACCTATCTC GACCGCGCCT ATATGGGCGG CGGTACTTTT GGCGCGGCGG CGGCGGCGCA GTTCTATTTC GGCAAGAACA TCACCGATGT GAACCTTGCC GAATCCGCCA TGCTTGCCGG CCTGTTCAAG GCGCCGGCGA AATACGCGCC GCATGTCAAC CTGCCGGCGG CGCGTGCCCG CGCCAACGAA GTGCTGACCA ATCTGGTGCA GAGCGGGTTG ATGACCGAGG GCCAGGTGAT CGCCGCCAGG CGCAATCCGG CCACCGTCGT CGACCGCAAC GAGGTGGAAT CGCCCGATTT CTTCCTCGAT TGGGCTTTCG ACGAGGTCCA GCGGCTTTCG TCGCGCTTCC ACCAGCATTC GCTGATCGTG CGCACGACCA TCGACATGGG CATCCAGCAG GCGGCGGAGG ATTCGGTCGA GACGTCGCTG CGCGAATATG GCGAGGCCTA TCACGCCAAG CAGGGCGCGA TGGTGATGAT CGAAAACGGT GGCGCCGTGC GCGCCATGGT CGGCGGCCGG GATTACGGGG AGAGCCAGTT CAACCGCGCC AGCAGGGCGC TGCGCCAGCC GGGCTCGTCC TTCAAGGTCT ACACTTATGC GGTGGCGATG GAGAGCGGCA TGACGCCGCA GACGACGATC GTCGATGCGC CGATCTACTG GGGCAACTGG AGCCCGCACA ATTACGCAAA CCGCTATGCC GGCCGCATCA CACTCGAGAC CGCGATCGCC CAGTCGATCA ACACCGTGCC GGTGCGGCTC GCCAAGGAAA AACTCGGTAT TCAGCCGATC CGGGCGATGG CGAAGAACCT CGGCGTCGAA ACGCCCATCC GCGACGACGT CACCATCCCG ATCGGCACCT CCGAGGTGAC GGTCCTCGAC CAGGCGACGG CCTATGCCAC CTTCCCGGCC GGCGGCTACC AGTCGCGCCG CCACGGCATC ACCCAGATCC TCGATTACGA CGGCGACGTG CTCTACGATT TCGACCGTGA CGAGCCGGCG CCGAAACGCG TGCTCTCCGA ACAGGCCGAC GCCTATATGA ACCAGATGTT GTCGCGTGTT CCCTATGTCG GCACGGCGCG CAAGGCAGCC CTCGACAACG GCATCCTGAC GGCCGGCAAG ACCGGCACGA CCCAGGCCTA TCGCGACGCC TGGTTCGTCG GCTTCACCGG CAATTACACC TGCGCCGTCT GGTTCGGCAA TGACGACTAC ACCTCGACCA ACGAGATGAC CGGCGGCTCG CTGCCGGCGA TGACCTTCAA GCGCGCCATG GACTACGCCC ACCAGGGTGT GACGCTGCGC GCCATCCCCG GCGTCGAAAA TCCCCTGCCC TCGGAAAAGG ACCTCGCCAA GACCGCCGCC GCCAAGCCGC AGGACGGATT GCCGCAGCTC ATCCGGCCGC GCATGCTCTC GGTTCAATCG ACCGACATCC TCAAGAAGCT CGGCGAAAAG CTGAAGAATG CCGCCCCGCT CGCGCCAGCG AAGGTGGCGA GCGCGGAGTA G
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Protein sequence | MQDPDNPGNG PGNGPENGPE KRPGKAASEA AEKRPAKSRH ILLRIDSWID STVWNAGFRA AEIWEDITIF FRRFRVRGWK RMVFELAGEG LTLGTAGSVL MLLLAQPAFE ATKEDWRNRG DFAVTFTDRY GNVIGHRGVI HQNSVPIDEL PDSLIKSVIA TEDRRFFDHF GIDFIGLFRA MSENARAGEV VQGGSTLTQQ LAKNLFLSNE RSIDRKVTEA FLALWLEANL SKKEILSTYL DRAYMGGGTF GAAAAAQFYF GKNITDVNLA ESAMLAGLFK APAKYAPHVN LPAARARANE VLTNLVQSGL MTEGQVIAAR RNPATVVDRN EVESPDFFLD WAFDEVQRLS SRFHQHSLIV RTTIDMGIQQ AAEDSVETSL REYGEAYHAK QGAMVMIENG GAVRAMVGGR DYGESQFNRA SRALRQPGSS FKVYTYAVAM ESGMTPQTTI VDAPIYWGNW SPHNYANRYA GRITLETAIA QSINTVPVRL AKEKLGIQPI RAMAKNLGVE TPIRDDVTIP IGTSEVTVLD QATAYATFPA GGYQSRRHGI TQILDYDGDV LYDFDRDEPA PKRVLSEQAD AYMNQMLSRV PYVGTARKAA LDNGILTAGK TGTTQAYRDA WFVGFTGNYT CAVWFGNDDY TSTNEMTGGS LPAMTFKRAM DYAHQGVTLR AIPGVENPLP SEKDLAKTAA AKPQDGLPQL IRPRMLSVQS TDILKKLGEK LKNAAPLAPA KVASAE
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