Gene Rleg_1022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_1022 
Symbol 
ID8015512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp1004088 
End bp1006298 
Gene Length2211 bp 
Protein Length736 aa 
Translation table11 
GC content64% 
IMG OID644823605 
Productpenicillin-binding protein, 1A family 
Protein accessionYP_002974856 
Protein GI241203760 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0744] Membrane carboxypeptidase (penicillin-binding protein) 
TIGRFAM ID[TIGR02074] penicillin-binding protein, 1A family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.53642 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGGATC CGGACAACCC AGGAAATGGG CCAGGAAATG GGCCAGAAAA CGGGCCAGAA 
AAAAGGCCCG GAAAAGCGGC GAGCGAGGCA GCGGAAAAGC GGCCGGCGAA GAGCCGTCAC
ATTCTACTGC GCATCGATTC CTGGATCGAT TCGACCGTCT GGAACGCCGG CTTCCGCGCT
GCCGAGATCT GGGAAGACAT TACCATTTTC TTCCGCCGCT TCCGCGTGCG CGGCTGGAAG
CGCATGGTCT TCGAACTCGC CGGCGAAGGG CTGACGCTCG GGACGGCCGG CTCGGTGCTG
ATGCTGCTGC TTGCCCAGCC CGCCTTCGAG GCAACCAAGG AAGACTGGCG CAACCGCGGC
GATTTCGCCG TCACCTTCAC TGACCGCTAC GGCAACGTCA TCGGCCATCG CGGCGTCATC
CACCAGAATT CCGTACCGAT CGACGAGCTG CCGGATTCGC TGATCAAATC GGTGATCGCC
ACCGAGGACC GGCGCTTCTT CGACCATTTC GGCATCGATT TCATCGGCCT CTTCCGCGCC
ATGAGCGAGA ATGCGCGCGC GGGCGAAGTC GTCCAAGGCG GCTCGACACT GACGCAGCAG
CTCGCCAAGA ACCTGTTCCT GTCGAACGAA CGCTCGATCG ACCGCAAGGT CACCGAGGCG
TTCCTGGCAC TGTGGCTCGA GGCGAACCTT TCCAAGAAGG AAATCCTCTC CACCTATCTC
GACCGCGCCT ATATGGGCGG CGGTACTTTT GGCGCGGCGG CGGCGGCGCA GTTCTATTTC
GGCAAGAACA TCACCGATGT GAACCTTGCC GAATCCGCCA TGCTTGCCGG CCTGTTCAAG
GCGCCGGCGA AATACGCGCC GCATGTCAAC CTGCCGGCGG CGCGTGCCCG CGCCAACGAA
GTGCTGACCA ATCTGGTGCA GAGCGGGTTG ATGACCGAGG GCCAGGTGAT CGCCGCCAGG
CGCAATCCGG CCACCGTCGT CGACCGCAAC GAGGTGGAAT CGCCCGATTT CTTCCTCGAT
TGGGCTTTCG ACGAGGTCCA GCGGCTTTCG TCGCGCTTCC ACCAGCATTC GCTGATCGTG
CGCACGACCA TCGACATGGG CATCCAGCAG GCGGCGGAGG ATTCGGTCGA GACGTCGCTG
CGCGAATATG GCGAGGCCTA TCACGCCAAG CAGGGCGCGA TGGTGATGAT CGAAAACGGT
GGCGCCGTGC GCGCCATGGT CGGCGGCCGG GATTACGGGG AGAGCCAGTT CAACCGCGCC
AGCAGGGCGC TGCGCCAGCC GGGCTCGTCC TTCAAGGTCT ACACTTATGC GGTGGCGATG
GAGAGCGGCA TGACGCCGCA GACGACGATC GTCGATGCGC CGATCTACTG GGGCAACTGG
AGCCCGCACA ATTACGCAAA CCGCTATGCC GGCCGCATCA CACTCGAGAC CGCGATCGCC
CAGTCGATCA ACACCGTGCC GGTGCGGCTC GCCAAGGAAA AACTCGGTAT TCAGCCGATC
CGGGCGATGG CGAAGAACCT CGGCGTCGAA ACGCCCATCC GCGACGACGT CACCATCCCG
ATCGGCACCT CCGAGGTGAC GGTCCTCGAC CAGGCGACGG CCTATGCCAC CTTCCCGGCC
GGCGGCTACC AGTCGCGCCG CCACGGCATC ACCCAGATCC TCGATTACGA CGGCGACGTG
CTCTACGATT TCGACCGTGA CGAGCCGGCG CCGAAACGCG TGCTCTCCGA ACAGGCCGAC
GCCTATATGA ACCAGATGTT GTCGCGTGTT CCCTATGTCG GCACGGCGCG CAAGGCAGCC
CTCGACAACG GCATCCTGAC GGCCGGCAAG ACCGGCACGA CCCAGGCCTA TCGCGACGCC
TGGTTCGTCG GCTTCACCGG CAATTACACC TGCGCCGTCT GGTTCGGCAA TGACGACTAC
ACCTCGACCA ACGAGATGAC CGGCGGCTCG CTGCCGGCGA TGACCTTCAA GCGCGCCATG
GACTACGCCC ACCAGGGTGT GACGCTGCGC GCCATCCCCG GCGTCGAAAA TCCCCTGCCC
TCGGAAAAGG ACCTCGCCAA GACCGCCGCC GCCAAGCCGC AGGACGGATT GCCGCAGCTC
ATCCGGCCGC GCATGCTCTC GGTTCAATCG ACCGACATCC TCAAGAAGCT CGGCGAAAAG
CTGAAGAATG CCGCCCCGCT CGCGCCAGCG AAGGTGGCGA GCGCGGAGTA G
 
Protein sequence
MQDPDNPGNG PGNGPENGPE KRPGKAASEA AEKRPAKSRH ILLRIDSWID STVWNAGFRA 
AEIWEDITIF FRRFRVRGWK RMVFELAGEG LTLGTAGSVL MLLLAQPAFE ATKEDWRNRG
DFAVTFTDRY GNVIGHRGVI HQNSVPIDEL PDSLIKSVIA TEDRRFFDHF GIDFIGLFRA
MSENARAGEV VQGGSTLTQQ LAKNLFLSNE RSIDRKVTEA FLALWLEANL SKKEILSTYL
DRAYMGGGTF GAAAAAQFYF GKNITDVNLA ESAMLAGLFK APAKYAPHVN LPAARARANE
VLTNLVQSGL MTEGQVIAAR RNPATVVDRN EVESPDFFLD WAFDEVQRLS SRFHQHSLIV
RTTIDMGIQQ AAEDSVETSL REYGEAYHAK QGAMVMIENG GAVRAMVGGR DYGESQFNRA
SRALRQPGSS FKVYTYAVAM ESGMTPQTTI VDAPIYWGNW SPHNYANRYA GRITLETAIA
QSINTVPVRL AKEKLGIQPI RAMAKNLGVE TPIRDDVTIP IGTSEVTVLD QATAYATFPA
GGYQSRRHGI TQILDYDGDV LYDFDRDEPA PKRVLSEQAD AYMNQMLSRV PYVGTARKAA
LDNGILTAGK TGTTQAYRDA WFVGFTGNYT CAVWFGNDDY TSTNEMTGGS LPAMTFKRAM
DYAHQGVTLR AIPGVENPLP SEKDLAKTAA AKPQDGLPQL IRPRMLSVQS TDILKKLGEK
LKNAAPLAPA KVASAE