Gene Rleg_0989 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_0989 
Symbol 
ID8012128 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp975861 
End bp976721 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content65% 
IMG OID644823572 
Productpolysaccharide deacetylase 
Protein accessionYP_002974823 
Protein GI241203727 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0726] Predicted xylanase/chitin deacetylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGCA TCCTGCTCGC TTCGGCGTTC CTTCTCGTCA ACATCTCCGC TGCATTCGCG 
GACGAAACCC CGTCAGCGCT GCCCGCCCCG GCCGCAGTCA GTCCGGTCGC GGCTGCAGTC
AGTTCGGTCC CGGCTGCAGT CAGTCCGGTC CCGGCTGCAG TCAGTCCGGC CCCGAAGGCG
TCGGCGCCAA AGCTTGTCGA GCCGCATCTG CACATCGCCC GCTCGAACCT TGTCGGCCAC
GCTCGCATTG CGCTCACCTT CGATGCCTGC ATGGGGCAGG CGGACGAGCG CATCCTTTCG
ACGCTGGTGC GTGAACGCAT CCCGGCAACG ATCTTCGTCA CCGCCCGCTG GCTGAAGCGC
AATCCAGCAG CACTTGCCGT CTTCCTGCAA AACCCCGATC TCTTCGAACT CGAAAATCAT
GGCCAGAACC ATATTCCGGC CGTCGACACG CCGACGCTGA TTTATGGCAT CGCGTCCGCC
GGCTCGCCGC AGGCGGTGCG GCAGGAGGTC GAAGGCGGCG CTGCCGCCAT GGTCGCAGCC
GGCATCCCGG CGCCGCACTG GTTCCGGGGT TCGACCGCCA AATATGACCT GTCCGCCATC
GGCGAGATTC GCGCCATGGG CTATCGCATT GCCGGTTATT CGGTAAACGG CGACGGCGGC
TCGCTGCTTG GGGCTGTCAT CACCGAAAAG CGCATCGCTT CCGCCAAGGA CGGCGACGTC
GTCATCTCCC ACATCAACCA GCCGACCCAT ACGGCCGGCG AAGGGGTGGC GAAGGCGCTG
GTCGATCTCA AGGCCAAGGG CACCCAATTC GTCCGCCTCC AGGATGTCGA GGACACCGGC
GACGACAAAA CGACCGAATA G
 
Protein sequence
MNRILLASAF LLVNISAAFA DETPSALPAP AAVSPVAAAV SSVPAAVSPV PAAVSPAPKA 
SAPKLVEPHL HIARSNLVGH ARIALTFDAC MGQADERILS TLVRERIPAT IFVTARWLKR
NPAALAVFLQ NPDLFELENH GQNHIPAVDT PTLIYGIASA GSPQAVRQEV EGGAAAMVAA
GIPAPHWFRG STAKYDLSAI GEIRAMGYRI AGYSVNGDGG SLLGAVITEK RIASAKDGDV
VISHINQPTH TAGEGVAKAL VDLKAKGTQF VRLQDVEDTG DDKTTE