Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_0989 |
Symbol | |
ID | 8012128 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | + |
Start bp | 975861 |
End bp | 976721 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644823572 |
Product | polysaccharide deacetylase |
Protein accession | YP_002974823 |
Protein GI | 241203727 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACCGCA TCCTGCTCGC TTCGGCGTTC CTTCTCGTCA ACATCTCCGC TGCATTCGCG GACGAAACCC CGTCAGCGCT GCCCGCCCCG GCCGCAGTCA GTCCGGTCGC GGCTGCAGTC AGTTCGGTCC CGGCTGCAGT CAGTCCGGTC CCGGCTGCAG TCAGTCCGGC CCCGAAGGCG TCGGCGCCAA AGCTTGTCGA GCCGCATCTG CACATCGCCC GCTCGAACCT TGTCGGCCAC GCTCGCATTG CGCTCACCTT CGATGCCTGC ATGGGGCAGG CGGACGAGCG CATCCTTTCG ACGCTGGTGC GTGAACGCAT CCCGGCAACG ATCTTCGTCA CCGCCCGCTG GCTGAAGCGC AATCCAGCAG CACTTGCCGT CTTCCTGCAA AACCCCGATC TCTTCGAACT CGAAAATCAT GGCCAGAACC ATATTCCGGC CGTCGACACG CCGACGCTGA TTTATGGCAT CGCGTCCGCC GGCTCGCCGC AGGCGGTGCG GCAGGAGGTC GAAGGCGGCG CTGCCGCCAT GGTCGCAGCC GGCATCCCGG CGCCGCACTG GTTCCGGGGT TCGACCGCCA AATATGACCT GTCCGCCATC GGCGAGATTC GCGCCATGGG CTATCGCATT GCCGGTTATT CGGTAAACGG CGACGGCGGC TCGCTGCTTG GGGCTGTCAT CACCGAAAAG CGCATCGCTT CCGCCAAGGA CGGCGACGTC GTCATCTCCC ACATCAACCA GCCGACCCAT ACGGCCGGCG AAGGGGTGGC GAAGGCGCTG GTCGATCTCA AGGCCAAGGG CACCCAATTC GTCCGCCTCC AGGATGTCGA GGACACCGGC GACGACAAAA CGACCGAATA G
|
Protein sequence | MNRILLASAF LLVNISAAFA DETPSALPAP AAVSPVAAAV SSVPAAVSPV PAAVSPAPKA SAPKLVEPHL HIARSNLVGH ARIALTFDAC MGQADERILS TLVRERIPAT IFVTARWLKR NPAALAVFLQ NPDLFELENH GQNHIPAVDT PTLIYGIASA GSPQAVRQEV EGGAAAMVAA GIPAPHWFRG STAKYDLSAI GEIRAMGYRI AGYSVNGDGG SLLGAVITEK RIASAKDGDV VISHINQPTH TAGEGVAKAL VDLKAKGTQF VRLQDVEDTG DDKTTE
|
| |