Gene Rleg_0960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_0960 
Symbol 
ID8012103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp947243 
End bp948484 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content65% 
IMG OID644823544 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_002974795 
Protein GI241203699 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.272153 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATA CGCAATTGGA CGCCGCCAGC GCCAGGCCGG GCTCGATCCA CTGGAAGCGC 
AATCTTACCA TCTCGCTGAT CGGCTCCTTC ACCACGATCG TGGCGATGAC GCTGCTGCTT
CCCTTCCTGC CGCTCTATGT CGAGGAGCTA GGCGTCAGCG ACCATGCTGA CATCGTGCAA
TGGTCGGGCA TCGCCTATGG CGCCACCTTC TTTGCCGCGG CTCTGGTCGC TCCGCTCTGG
GGCCGGCTCG GCGATATCTA CGGCCGCAAG CTGATGCTGG TGCGCGCCAG CCTCGGGATG
ACGCTGGCGA TCTCGCTGAT GGGCATGGCC GGCAATGTCT GGCAGTTGGT GGCGCTGCGC
CTCTTCGTCG GGCTTGCCGG CGGTTATGCC TCCGGCTCGA TGGTGCTGGT GGCGACGCAG
ACGCCGAAGG ACCGCTCGGC CTGGGCGCTC GGCGTGCTCT CCTCCGGAAT CATGGCCGGC
AATCTCGTCG GGCCGCTGAT CGGCGGCGCG CTGCCGCCGA TCATTGGCAT CCGCGGCACG
TTCCTCGCCG CCGGCGGCAT GATCTTCCTC GCCTTTCTCG CCACGGCCTT GCTGATCAAG
GAAGAGAAAT CGCCGGCCCG CAAGCAGGCG GCCAAGGCCA GCGGCGGCTG GAAATCCATT
GCCGACAAGC GGCCGGTCAT CGCCATGCTG GCAACCGGCA TGCTCTTGAT GTTTGCCAAT
ATGTCGATCG AGCCGATCAT CACCGTCTAT GTCGCGCAGC TGGTGCCCGT CGAATCCCAG
GTGACGATGG TATCGGGCGT CGTCATGTCG GCTGCCGCCC TCGGCAGCAT TCTCTCGGCC
TCATGGCTCG GCAAGCTTGC CGACAGGATC GGCCATTGGC CGGTGATTGC AGGAGCGCTC
GCCGTCGCCG GGCTGCTGCT GATCCCGCAG GCCTTCGTCA CCAGTTCCTG GCAGCTGATC
ATCCTGCGCT TCATGATGGG TGTGGCGATC GGCGGGCTGC TGCCCTGCAT CGCCGCGGTC
ATCCGCCACA GCGTGCCTGA TAGTGCGGCC GGCAGCATTC TCGGGTTTTC CATCTCGTCG
CAATATGTCG GCCAGGTGGC CGGCCCCATC CTTGGCGGTT TTGTCGGTGG GCATATCGGC
ATGCGGGCGG TGTTCCTCGG TACCTCCGTG CTGCTTCTCG CTGGTGCGGC CTATGCCTGG
ATCGTGCGGC CGAGGGATGG GGAGACTCGG GAGTCGACCT AA
 
Protein sequence
MTDTQLDAAS ARPGSIHWKR NLTISLIGSF TTIVAMTLLL PFLPLYVEEL GVSDHADIVQ 
WSGIAYGATF FAAALVAPLW GRLGDIYGRK LMLVRASLGM TLAISLMGMA GNVWQLVALR
LFVGLAGGYA SGSMVLVATQ TPKDRSAWAL GVLSSGIMAG NLVGPLIGGA LPPIIGIRGT
FLAAGGMIFL AFLATALLIK EEKSPARKQA AKASGGWKSI ADKRPVIAML ATGMLLMFAN
MSIEPIITVY VAQLVPVESQ VTMVSGVVMS AAALGSILSA SWLGKLADRI GHWPVIAGAL
AVAGLLLIPQ AFVTSSWQLI ILRFMMGVAI GGLLPCIAAV IRHSVPDSAA GSILGFSISS
QYVGQVAGPI LGGFVGGHIG MRAVFLGTSV LLLAGAAYAW IVRPRDGETR EST