Gene Rleg_0909 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_0909 
Symbol 
ID8015497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp898466 
End bp900811 
Gene Length2346 bp 
Protein Length781 aa 
Translation table11 
GC content64% 
IMG OID644823494 
Productdiguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) 
Protein accessionYP_002974745 
Protein GI241203649 
COG category[T] Signal transduction mechanisms 
COG ID[COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain 
TIGRFAM ID[TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.015368 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.142992 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGACGG TACGGGATAC GGCCTTCGGC CGCAGGGGGA ATGGCGTCAT GCGCGAATTG 
GGTGCCAGGC GATGGGAATC AACCGATGCC CTGACGGCCG AAACGCGGCG TATCGTCGCC
GCGACGGAGG CAATGATGGC ATCGACCGCC CACCACCTTT CCGAGGGCAT CGAGAACCTG
CGCCTCAAGG AAATCGTCCA CGAACTTCCG GATTTTCTCT ACGTCAAGGA TCGTGACAGC
CGCTTCGTCT TCGCCAATAC AGTCACCGCC AGCAGCCTTG GCCTGGAGAG CGCTGCGCTG
ATCACCGGCA AGCGCGATTT CGACCTGTTC GATTTCGAGA CGGCGCTCCA CCATTTCGAT
ATTGAGCAGC AGATCATGAC GACCGGCGAA GCCCGCATCG ACATGGAGGA ATCCTACGTC
TTTCCCGGCA GCAGAAGACC GATATGCCGG CTGACCTCGA AGATACCCCT GCGCAACGAT
CGCGGCGAAA TCGTCGGTCT GATCGGTGTT TCCCGTGATA TCACCGAACG CAAGCGCCAG
GAGGATCTGC ATCGCGGCCA GGCGAGCCTG CTCGAAATGA TCGCCCGCAA CGAGCCGCTG
CCGATGATCC TCGAGGCGCT CGTGCTGATG ATCGAGGCGC AACTGACCGG GATCGACGGA
TCGGTGCTGC TGCTCGACAG CGAGGGCACC AGGCTCTATC ACGGCGCCTC TCCCAATCTG
CCCGGCGGCT ACAGCCGCCT CATCGATGGT GTCACGATCG GTCCCAAGGT CGGCTCCTGC
GGCACCGCCG CCTGGCGCGG TCAGACCGTG ATCGTCGACG ACGTGATGAG TGATCCGCTC
TGGGAGGATT TTCGCGCCCT GATCGCCCCG TTCGGCTTCC GCTCCTGCTG GTCGACGCCG
ATCGCCACCT CACAGAACAA CGTGCTCGGC ACTTTCGCGC TCTATTCCAG GGAAGTCCGC
CGTCCCACCG ACCACGAGAT GACGCTGGTG GCGCTCGCCA CCCATATCGC CGGCATCGCC
ATCGAGCGCA AGCGTGTCGA CGACCGCATT CATTTCATGG CCCATCATGA CGATCTGACG
GGCCTGCCGA ACCGCGCCTT CCTCAAGGAA CGGCTGGCGA GCATCCTCGA CCAGGCCCGG
CGCAACAACC GCAAGGTGAC CGTCGCCTAT ATCGATCTCG ACAATTTCAA GGACATCAAT
GACGGCCGCG GCCACGCTGC CGGCGACGAG GTGCTGAAGG AGATCGCCAC CCGCATGGCC
AATAGCGTCA GGGCGTCTGA TATGGTGGTA CGACTCGGCG GCGACGAATT CCTCGTCGTG
CTCGTCCACC AGTCAAGTCA CGATGCCGGC ATCACGCGCC GCCTTCGCGA GCTGCAGAAG
GCGATCAACC GGCCGATTCG CGGGGCGGAC GGCGAAATCA CCATCACCTC GAGCATCGGC
GTTGCCGCCT TCCCCTTCGA TGGCGCAACC TCGGAAGAGC TCCTCGCCAA TGCCGACCGC
GCCATGTACC GCGCCAAGGA ACTCGGCCGC AACACATTGC AACATCACGA AGGCGGCAGC
ACGCCGGTCG GAATGCCGCT CGGCGAGCAC GAAGAATTGC ATCAGGCGAT CACCGGCGAC
CAGCTGTTCC TCCAATACCA GCCGCAGGTT GATGTCGCCA CCGGCCGCAT CACCGGCCTC
GAGGCGCTGG TGCGCTGGAA CCATCCGGCA AAGGGCAGGG TGCCGCCGGT CAATTTCATT
CCGCTCGCCG AAGAGACCGG CCTGATCGTT CCCCTCGGTC TCTGGGTACT GAACGAGGCC
TGCCGCCAGG CGCGCCAATG GCAGGACATG GGCCTGGCGC CGCTGACAAT CGCCGTCAAT
GTCTCGGCCA AACAGTTCGC CGATCCGGAC TTCGCAACCC ATGTCGCCGA GGCGCTCGAG
CGCCACCGCC TGCAGTCCCG CTGGCTGGAG CTTGAAGTCA CCGAAAGCGT GGTGATGCAG
AATGCCGAAC GCGCGCTTGC CATGATGGAA ACGCTGCGGG GGCTGGGCGT GCGCCTGTCG
ATCGACGATT TCGGCTCCGG CTATTCCAGC CTGGCGGCGC TGAAGACCTT CCCTTTCGAC
CGCCTGAAGA TGGACCGCTC GCTGGTCGAG GCCCTGCCGG GCGACAAGAC CGCAGTCGCC
ATCGCCTCGG CGGTCATTTC GCTGGCGCAG ACGCTGAAGC TCTCGGTTCT CGCCGAAGGC
GTCGAAACCG ACGCCCAGAT GGATTTCCTG CGCCAGGCCC ACTGCGAGGA GGCGCAAGGC
TTCCGCTTCT CCAAACCGGT CTCACCGGAG GAGATCCCGG CATTGCTGCG GGCGCGTAGT
CTTTAG
 
Protein sequence
MMTVRDTAFG RRGNGVMREL GARRWESTDA LTAETRRIVA ATEAMMASTA HHLSEGIENL 
RLKEIVHELP DFLYVKDRDS RFVFANTVTA SSLGLESAAL ITGKRDFDLF DFETALHHFD
IEQQIMTTGE ARIDMEESYV FPGSRRPICR LTSKIPLRND RGEIVGLIGV SRDITERKRQ
EDLHRGQASL LEMIARNEPL PMILEALVLM IEAQLTGIDG SVLLLDSEGT RLYHGASPNL
PGGYSRLIDG VTIGPKVGSC GTAAWRGQTV IVDDVMSDPL WEDFRALIAP FGFRSCWSTP
IATSQNNVLG TFALYSREVR RPTDHEMTLV ALATHIAGIA IERKRVDDRI HFMAHHDDLT
GLPNRAFLKE RLASILDQAR RNNRKVTVAY IDLDNFKDIN DGRGHAAGDE VLKEIATRMA
NSVRASDMVV RLGGDEFLVV LVHQSSHDAG ITRRLRELQK AINRPIRGAD GEITITSSIG
VAAFPFDGAT SEELLANADR AMYRAKELGR NTLQHHEGGS TPVGMPLGEH EELHQAITGD
QLFLQYQPQV DVATGRITGL EALVRWNHPA KGRVPPVNFI PLAEETGLIV PLGLWVLNEA
CRQARQWQDM GLAPLTIAVN VSAKQFADPD FATHVAEALE RHRLQSRWLE LEVTESVVMQ
NAERALAMME TLRGLGVRLS IDDFGSGYSS LAALKTFPFD RLKMDRSLVE ALPGDKTAVA
IASAVISLAQ TLKLSVLAEG VETDAQMDFL RQAHCEEAQG FRFSKPVSPE EIPALLRARS
L