Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_0909 |
Symbol | |
ID | 8015497 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | + |
Start bp | 898466 |
End bp | 900811 |
Gene Length | 2346 bp |
Protein Length | 781 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644823494 |
Product | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) |
Protein accession | YP_002974745 |
Protein GI | 241203649 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.015368 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.142992 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGACGG TACGGGATAC GGCCTTCGGC CGCAGGGGGA ATGGCGTCAT GCGCGAATTG GGTGCCAGGC GATGGGAATC AACCGATGCC CTGACGGCCG AAACGCGGCG TATCGTCGCC GCGACGGAGG CAATGATGGC ATCGACCGCC CACCACCTTT CCGAGGGCAT CGAGAACCTG CGCCTCAAGG AAATCGTCCA CGAACTTCCG GATTTTCTCT ACGTCAAGGA TCGTGACAGC CGCTTCGTCT TCGCCAATAC AGTCACCGCC AGCAGCCTTG GCCTGGAGAG CGCTGCGCTG ATCACCGGCA AGCGCGATTT CGACCTGTTC GATTTCGAGA CGGCGCTCCA CCATTTCGAT ATTGAGCAGC AGATCATGAC GACCGGCGAA GCCCGCATCG ACATGGAGGA ATCCTACGTC TTTCCCGGCA GCAGAAGACC GATATGCCGG CTGACCTCGA AGATACCCCT GCGCAACGAT CGCGGCGAAA TCGTCGGTCT GATCGGTGTT TCCCGTGATA TCACCGAACG CAAGCGCCAG GAGGATCTGC ATCGCGGCCA GGCGAGCCTG CTCGAAATGA TCGCCCGCAA CGAGCCGCTG CCGATGATCC TCGAGGCGCT CGTGCTGATG ATCGAGGCGC AACTGACCGG GATCGACGGA TCGGTGCTGC TGCTCGACAG CGAGGGCACC AGGCTCTATC ACGGCGCCTC TCCCAATCTG CCCGGCGGCT ACAGCCGCCT CATCGATGGT GTCACGATCG GTCCCAAGGT CGGCTCCTGC GGCACCGCCG CCTGGCGCGG TCAGACCGTG ATCGTCGACG ACGTGATGAG TGATCCGCTC TGGGAGGATT TTCGCGCCCT GATCGCCCCG TTCGGCTTCC GCTCCTGCTG GTCGACGCCG ATCGCCACCT CACAGAACAA CGTGCTCGGC ACTTTCGCGC TCTATTCCAG GGAAGTCCGC CGTCCCACCG ACCACGAGAT GACGCTGGTG GCGCTCGCCA CCCATATCGC CGGCATCGCC ATCGAGCGCA AGCGTGTCGA CGACCGCATT CATTTCATGG CCCATCATGA CGATCTGACG GGCCTGCCGA ACCGCGCCTT CCTCAAGGAA CGGCTGGCGA GCATCCTCGA CCAGGCCCGG CGCAACAACC GCAAGGTGAC CGTCGCCTAT ATCGATCTCG ACAATTTCAA GGACATCAAT GACGGCCGCG GCCACGCTGC CGGCGACGAG GTGCTGAAGG AGATCGCCAC CCGCATGGCC AATAGCGTCA GGGCGTCTGA TATGGTGGTA CGACTCGGCG GCGACGAATT CCTCGTCGTG CTCGTCCACC AGTCAAGTCA CGATGCCGGC ATCACGCGCC GCCTTCGCGA GCTGCAGAAG GCGATCAACC GGCCGATTCG CGGGGCGGAC GGCGAAATCA CCATCACCTC GAGCATCGGC GTTGCCGCCT TCCCCTTCGA TGGCGCAACC TCGGAAGAGC TCCTCGCCAA TGCCGACCGC GCCATGTACC GCGCCAAGGA ACTCGGCCGC AACACATTGC AACATCACGA AGGCGGCAGC ACGCCGGTCG GAATGCCGCT CGGCGAGCAC GAAGAATTGC ATCAGGCGAT CACCGGCGAC CAGCTGTTCC TCCAATACCA GCCGCAGGTT GATGTCGCCA CCGGCCGCAT CACCGGCCTC GAGGCGCTGG TGCGCTGGAA CCATCCGGCA AAGGGCAGGG TGCCGCCGGT CAATTTCATT CCGCTCGCCG AAGAGACCGG CCTGATCGTT CCCCTCGGTC TCTGGGTACT GAACGAGGCC TGCCGCCAGG CGCGCCAATG GCAGGACATG GGCCTGGCGC CGCTGACAAT CGCCGTCAAT GTCTCGGCCA AACAGTTCGC CGATCCGGAC TTCGCAACCC ATGTCGCCGA GGCGCTCGAG CGCCACCGCC TGCAGTCCCG CTGGCTGGAG CTTGAAGTCA CCGAAAGCGT GGTGATGCAG AATGCCGAAC GCGCGCTTGC CATGATGGAA ACGCTGCGGG GGCTGGGCGT GCGCCTGTCG ATCGACGATT TCGGCTCCGG CTATTCCAGC CTGGCGGCGC TGAAGACCTT CCCTTTCGAC CGCCTGAAGA TGGACCGCTC GCTGGTCGAG GCCCTGCCGG GCGACAAGAC CGCAGTCGCC ATCGCCTCGG CGGTCATTTC GCTGGCGCAG ACGCTGAAGC TCTCGGTTCT CGCCGAAGGC GTCGAAACCG ACGCCCAGAT GGATTTCCTG CGCCAGGCCC ACTGCGAGGA GGCGCAAGGC TTCCGCTTCT CCAAACCGGT CTCACCGGAG GAGATCCCGG CATTGCTGCG GGCGCGTAGT CTTTAG
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Protein sequence | MMTVRDTAFG RRGNGVMREL GARRWESTDA LTAETRRIVA ATEAMMASTA HHLSEGIENL RLKEIVHELP DFLYVKDRDS RFVFANTVTA SSLGLESAAL ITGKRDFDLF DFETALHHFD IEQQIMTTGE ARIDMEESYV FPGSRRPICR LTSKIPLRND RGEIVGLIGV SRDITERKRQ EDLHRGQASL LEMIARNEPL PMILEALVLM IEAQLTGIDG SVLLLDSEGT RLYHGASPNL PGGYSRLIDG VTIGPKVGSC GTAAWRGQTV IVDDVMSDPL WEDFRALIAP FGFRSCWSTP IATSQNNVLG TFALYSREVR RPTDHEMTLV ALATHIAGIA IERKRVDDRI HFMAHHDDLT GLPNRAFLKE RLASILDQAR RNNRKVTVAY IDLDNFKDIN DGRGHAAGDE VLKEIATRMA NSVRASDMVV RLGGDEFLVV LVHQSSHDAG ITRRLRELQK AINRPIRGAD GEITITSSIG VAAFPFDGAT SEELLANADR AMYRAKELGR NTLQHHEGGS TPVGMPLGEH EELHQAITGD QLFLQYQPQV DVATGRITGL EALVRWNHPA KGRVPPVNFI PLAEETGLIV PLGLWVLNEA CRQARQWQDM GLAPLTIAVN VSAKQFADPD FATHVAEALE RHRLQSRWLE LEVTESVVMQ NAERALAMME TLRGLGVRLS IDDFGSGYSS LAALKTFPFD RLKMDRSLVE ALPGDKTAVA IASAVISLAQ TLKLSVLAEG VETDAQMDFL RQAHCEEAQG FRFSKPVSPE EIPALLRARS L
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