| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_0895 |
|---|
| Symbol | |
|---|
| ID | 8012045 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | - |
|---|
| Start bp | 886082 |
|---|
| End bp | 887521 |
|---|
| Gene Length | 1440 bp |
|---|
| Protein Length | 479 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644823480 |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_002974731 |
|---|
| Protein GI | 241203635 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.915282 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAATA TCGACCAGAC TGCAACCATC CCCAACGCTA GCTCCCTCTT CCGCCTCTTT
GCGCCCGAGC ACCTGCCGGC AACCTTGATG CTGGCAGGCG GCGTGACGCT TTATGCGGTG
GAGACTTACA TCATGGCGAC GATCGCGCCC TCGATCGTGC GCGATATCGG CGGCCTCGCG
TTGTTTTCCT GGGTCACCAG CCTGTTCGTC GCCGCGGCCG TACTCGGCTC GATCTTTGTC
GCCATGCGGC CGCGCGGCAT CGGGCTTCGA TCCGTCTATA TGGTCGCGGC GCTGGTCTTC
GGCGTCGGCA GCCTGGTTGC CGCAGCCGCA CCGTCGATGC CAGTGGTGCT GATCGGACGT
GCGGTGCAGG GTCTCGGAAC AGGCGCACTT GCCGCGATCG GCTATGCCTT TATCCGCTTC
GTTTATCCCG AGCCGCTATG GCCAAAAGCC TCGACGCTCT ATGCGGCGAT CTGGGGTGTG
GCGACAGTCA TCGGGCCGAC GTTCGGCGGC TTCTTTTCAT CCGGCCAAGC CTGGCGCTAC
GCATTCATCG TGCTCGTGCC GCTCGGCCTG CTGATGGCCT TCCTGGCGCC GCGGCTGTTG
CCAGAGGTCG AGGACGACCG CGAGCAGGTA AAGACGCCGA TTGCCCAGAT CGGGCTGCTG
CTTGCCGCCG TCCTGATGGT CAGCACGGCC GGCGCGATCG AGACGACAGC CACGAAGGTC
GCGCTGATCG CCGCTTCGGT CATCGCGGTC GCCGGCATGA TCTTCATCGA GAGCCGAAGC
CCGAACCGCC TGCTGCCCTC TGGCGCCGTC AGCCTTTCCC AGCCGATTTC CCGGGTCTAC
CTGGCGATGC TCGCCATGAC CGTCGTTCTC GTCAGCGACG TCTTCATTCC CTATTTCCTG
CAGACCCTGC ATGGCGTGGC TCCACTCGCA TCGGGTTATC TGGTGGCGCT GGTTGCCCTC
GGATGGACGT TTGCGGCCTT CCTCAGCGGC TCGCTGACCG GCAGGCGGGC GTACGCGGCA
ATCGTCATTG GCGCCCTCAT CGAGGCGGCG GCGACCGCTT GCCTCGCCGT CTTCCTCGCC
AAGGACAATC CCGAGGGGCA TATGCTCCTC ATCGTGCCGG CGGCGATCGG CATGTTCATG
ATGGGCTTCG GCATCGGTCT CGGCTGGGCG CATCTCGTCG CCATGGTTTT GAGGCTCGTC
GCCGACAACG AGAAAGACAA GGCTTCTGCC GCGATCCCAA CAATGAGTTC GCTCGGTGGG
GCGTTCGGGG CCGCCTTTGC CGGCGTCATC GCCAATGGCG CCGGCCTCGT TCATCCCGGC
GGCATATCAG GCGCGCTTTC GGCAGCGCAC TGGCTCTATC TGCTGATGGC GGTGCCAGGT
GTTCTCGCCG TCGCGGTGTC GCTGACATTA CCGCGCCGCG CGTCCGATAG GACGCACTAA
|
|---|
| Protein sequence | MSNIDQTATI PNASSLFRLF APEHLPATLM LAGGVTLYAV ETYIMATIAP SIVRDIGGLA
LFSWVTSLFV AAAVLGSIFV AMRPRGIGLR SVYMVAALVF GVGSLVAAAA PSMPVVLIGR
AVQGLGTGAL AAIGYAFIRF VYPEPLWPKA STLYAAIWGV ATVIGPTFGG FFSSGQAWRY
AFIVLVPLGL LMAFLAPRLL PEVEDDREQV KTPIAQIGLL LAAVLMVSTA GAIETTATKV
ALIAASVIAV AGMIFIESRS PNRLLPSGAV SLSQPISRVY LAMLAMTVVL VSDVFIPYFL
QTLHGVAPLA SGYLVALVAL GWTFAAFLSG SLTGRRAYAA IVIGALIEAA ATACLAVFLA
KDNPEGHMLL IVPAAIGMFM MGFGIGLGWA HLVAMVLRLV ADNEKDKASA AIPTMSSLGG
AFGAAFAGVI ANGAGLVHPG GISGALSAAH WLYLLMAVPG VLAVAVSLTL PRRASDRTH
|
|---|
| |