Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_0713 |
Symbol | |
ID | 8011882 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | + |
Start bp | 739422 |
End bp | 740423 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644823302 |
Product | periplasmic binding protein/LacI transcriptional regulator |
Protein accession | YP_002974555 |
Protein GI | 241203459 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0832389 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTCAACA TCACCAGACG CATGCTCATT ATCTCCGCCG GGCTCGCCAC CGTCTTGACC GCCGCACCCG CCTTCAGCGC GGACAAGATC GTCATCGGCT TCTCGCAGGC GAGCTCGAAC TCCGCCCACC GCAACACGAT GACCAAGCGC AACCAGGCCT ATGCAGCGGA ACACTTCAAG GATGTCGATC TGATCGTCAC CAACGCGGAA GGCAAATCCG CAAAGCAGAT TTCGGATGTC GAAAGCCTGA TGGTCCAGGG CATGAAGGTT CTGATGATTT CGGCGCAGGA TAGTGCCGCC ATCGCTCCGA CCATCAAGCA GGTCCTGGCT GCCGGCATTC CGGTCATCAC GCTCGAGCGC AGCCTCGATA TTCCCGTTAC GCTGCACGTC GGCCCGCACA ACAAACCGAT CGGCACGCTT GCCGGCAAGT ACATAGCCGA GGCGTTGAAA GGCAAGGGCA ATGTCGTCGA GATCAAGGGC GATCCGGCTG TCGCTCCCGC GGTGGAGCGC CATGAGGGCT TTGCCGAAGC CATCGCTGGC ACCGAGATCA AGGTGATCGC CGAAACCCAC GCCGACTGGG ACCAGGAAAA GGCGTTGAAG TTCATGGAAG ACACGCTTCA GCGTTTCCCG GCCGGGCAGA TTCAAGCCGT TTACGCCCAT AACGACAACA TGGCGTTTGG CGCGCTGCGG GCGATCCAGG CCGCCGGCCG TGACAAGGAA GGCATTCTTA TCATCGGCAT CGACGGCGAG AACGCCGCCA TCCGCGCCGT TGCCAAGGGC GACCTGACCG CGACCTTCAC ATATTCCACC GTCGCGCCTG AAGGCGTTAT TGCCGCGCAT GCGCTTGCCA CCAACGACAC CGCAGCGCTG GAAAAGCTCG GAACCTTGAC CAAGAAGGAC GACGGCTCGA TGGAAATCGA GATTGCGTCG AAGATGATCA CCAAGGAGAA CGCTGCCGAG TTCTTCTGCA AGGGCTTCGG CGACGACCCT GAATGCAAGT AA
|
Protein sequence | MLNITRRMLI ISAGLATVLT AAPAFSADKI VIGFSQASSN SAHRNTMTKR NQAYAAEHFK DVDLIVTNAE GKSAKQISDV ESLMVQGMKV LMISAQDSAA IAPTIKQVLA AGIPVITLER SLDIPVTLHV GPHNKPIGTL AGKYIAEALK GKGNVVEIKG DPAVAPAVER HEGFAEAIAG TEIKVIAETH ADWDQEKALK FMEDTLQRFP AGQIQAVYAH NDNMAFGALR AIQAAGRDKE GILIIGIDGE NAAIRAVAKG DLTATFTYST VAPEGVIAAH ALATNDTAAL EKLGTLTKKD DGSMEIEIAS KMITKENAAE FFCKGFGDDP ECK
|
| |