Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_0689 |
Symbol | |
ID | 8011862 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | - |
Start bp | 716136 |
End bp | 719033 |
Gene Length | 2898 bp |
Protein Length | 965 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644823279 |
Product | diguanylate cyclase/phosphodiesterase with PAS/PAC and periplasmic/7TM domain sensor(s) |
Protein accession | YP_002974532 |
Protein GI | 241203436 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCCCA AGTCACCGTC CGGACGAGTG ATCGCGGTGA TCGCAGCCCT TTTCCTGGCG GCCTTCGCCT TCGTGGCGGG TGTTGCCCAG GCGGCCGAAC CTGTAAAAAT TTCCCGTGAC GATACCGCGC TCGACCTGAC GGCAACGACG GAGATCTACG CCAACCAGGG CGAAGCCTTC CAGGTTTCGA CGGCGGCCGG CGCCGACGGC ATCCGCCGCC GCATCGAGGT CAGGGCAAGC TCGGAGAACC ATCAGGGCGA CTGGGCGGTA TTTGCGCTTG CCAATGTCTC GGAAGAACAG CTCGAGCGCG TCATCGTCGC GCCGCATTTC CGTCTGGTCA ATTCCAAGCT GTTCTGGCCG GATCTCGGCT CGCAGCGCAT CAGCGCGATT ACGCCGAGCG AAGGCTTCGC GCTCGACCGG CAGCCGAGCG ACGAGGCCGA CGTCTTCCGC ATCACGCTGA ACCCCGGCGC CGTCATCACC TTCGTCGCCG AACTGTCGAC GCCGGAACTG CCGCAGATCT ATCTCTGGGA ACCGAACGCC TACAAGGACA CGATCAACGC CTTCACGCTC TATCGCGGCA TCGTGCTCGG CATTGCCGGC CTGCTTGCCG TGTTCCTGAC CATCCTCTTC GTCGTCAAGG GCACCTCGAT GCTGCCGGCG ACGGCAGCAC TTGCCTGGGC GGTGCTCGGC TATATCTGCG TCGATTTCGG TTTTCTCGGC AAGCTGATCA GCGTCGCCTC GGCCGACCAG CGAATATGGC GCGCCTGCGC CGAGGTGGCG CTGGCGTCGA GTTTCGTCAT CTTCCTCTTC ACCTATCTCA ACCTCAACCG CTGGCATGCG CATCTGGGTT ACGCCACGCT TGCCTGGGTG CTCGGCCTTG CCCTGCTCTT CGGCGTGGCG ATCTACGATC CGTCGATTGC CGCCGGCATT GCCAGGCTTT CCTTCGCGCT GACGGCGACG ATGGGGTTGC TGCTGATCAT CTATCTCGGC TTCAACCGCT ACGACCGCGC CATCCTTTTG GTGCCGGCCT GGGCGCTGAT CCTCGTCTGG CTGTTCGGGG CGTGGCTGAC GGTCACCGGA CGGCTCGACA ACGACATCAT CCAGCCAGCA CTCGGCGGCG GCCTGGTGCT GATCGTGCTG TTGATCGGCT TCACTGTCAT GCAGCATGCT TTTGCCGGCG GCGCCTTCCA GCAGGGGCTG TTTTCCGATC TCGAGCGGCA ATCGCTGGCG CTGACCGGCT CCGGCGACAT GGTCTGGGAT TGGGACGTGG CGCGCGACCG CGTCGTCACC ATTCCCGACG TCTCGATCAA GCTCGGCCTG TCGCCCGGCG CCATGCATGG CGCGGCGCGC AACTGGCTGC CGCGGCTGCA CCCCGACGAC CGCGACCGCT TCCGCGCTAC GCTCGACGTG CTGCTCGAAC ACCGCCGCGG GCGGCTGAAC CACGAATTCC GCATTCGCGC CGAGGACGGG CATTTCCACT GGCTGCTGAT CCGCGCCCGG CCGGTGCTCG GCTCGAACGG CGAAATCATC CGCTGCGTCG GCACGATCGT CGACGTGACC GAACAGAAGA ATTCCGTCGA GCGGCTGCTG CACGATGCGC TGCACGACAA TCTGACCGGC CTGCCGAACC GGCAGGTCTT CCTCGACCGG TTGCAGTCGG TGTTGGCACT GGCGCCGGGC GGCGACACGC TGCGGCCGAC GGTGATGGTG ATCGATATCG ACCGCTACAA GCTGGTCAAT GATTCGCTCG GCGTTGCCGC CGGCGACAAT ATCCTCATCG CGCTGACGCG GCGGCTACGC CGCCTCTTGA AACCGCAGGA CACGCTGGCG CGGCTTGCCG GCGACCAGTT CGGCCTGATC CTGGTTTCCG AGCACAATCC GGCCAAGGTC GCCGATTTTG CCGATGCGAT CAGCAAGGCG ATCATGGTAC CGATCAACTT CGCCAATCGC GAGATCATCC TGACCGCCTC GGTCGGGCTT GCCTCCTGGG TCGACCGGCA GGAGAGCGCC ACCGGCCTGC TCAGCGATGC CGAGCTTGCG ATGTACCGGG CAAAACGAGC CGGCGGCAAC CGTGTCGAGC CGTTCCAGCC GGCCTTCCGC GACTTCGGCA CCGACCGGCT GCAGCTCGAA ACGGATCTGC GCCGCGCCAT CGAGCGCAAA GAATTGTCGA TGGTCTACCA GCCGATCGCA AGGCTGGAAG ATGTCGAGGT CGCCGGTTTC GAGGCGCTGA TGCGCTGGGA ACATCCCAAA CGCGGCAATA TCCCGCCGTC CGAATTCATC CCGATCGCCG AGGCCTCCGA TCTTATCGGC CCGCTCGGCA TGTTCGCACT GGAACAGGCG ACCAACGATC TGATGAGCTG GCAGCACCAG ACCGGCGAAT TGCCGATCTT CGTCTCGATC AATCTGTCGA GCGTGCAGTT GCTCAATAAC GAGCTCTATG ACGACGTGCG TTCGGTTCTC GCCAAGACGC ATTGCCAGCC CTCGCGCCTC AAGCTCGAAC TGACGGAATC CATGGTGATG GAAAATCCGG AACAGGCCCG GCTGGTGCTG CAGAAGCTGA AGGAAGCCGG CATCGGACTG GCGCTCGACG ATTTCGGCAC TGGCTATTCG TCGCTCGCCT ATCTCACCCG CTTCCCCTTC GACACGATCA AGCTCGACAA GACTTTGGTG CGCGACAGCA GCGACAAGAA GGCGATCGTG CTCCGGTCGG TGATATCAAT GGCGCGCGAA CTCGACATGA AGGTGGTGGC GGAGGGGATC GAATCCAACG AGGATGCGAT CGAGCTTGCC AAGATGGGCT GCAACTACGG CCAGAGCTAC CTTTTCGGCC CGCCAATCCC TTCGGAATCG GTGCTGCGGC TGCTGCGCGA CCGCTTTCCG CTGACGAAAC GGGCCTGA
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Protein sequence | MLPKSPSGRV IAVIAALFLA AFAFVAGVAQ AAEPVKISRD DTALDLTATT EIYANQGEAF QVSTAAGADG IRRRIEVRAS SENHQGDWAV FALANVSEEQ LERVIVAPHF RLVNSKLFWP DLGSQRISAI TPSEGFALDR QPSDEADVFR ITLNPGAVIT FVAELSTPEL PQIYLWEPNA YKDTINAFTL YRGIVLGIAG LLAVFLTILF VVKGTSMLPA TAALAWAVLG YICVDFGFLG KLISVASADQ RIWRACAEVA LASSFVIFLF TYLNLNRWHA HLGYATLAWV LGLALLFGVA IYDPSIAAGI ARLSFALTAT MGLLLIIYLG FNRYDRAILL VPAWALILVW LFGAWLTVTG RLDNDIIQPA LGGGLVLIVL LIGFTVMQHA FAGGAFQQGL FSDLERQSLA LTGSGDMVWD WDVARDRVVT IPDVSIKLGL SPGAMHGAAR NWLPRLHPDD RDRFRATLDV LLEHRRGRLN HEFRIRAEDG HFHWLLIRAR PVLGSNGEII RCVGTIVDVT EQKNSVERLL HDALHDNLTG LPNRQVFLDR LQSVLALAPG GDTLRPTVMV IDIDRYKLVN DSLGVAAGDN ILIALTRRLR RLLKPQDTLA RLAGDQFGLI LVSEHNPAKV ADFADAISKA IMVPINFANR EIILTASVGL ASWVDRQESA TGLLSDAELA MYRAKRAGGN RVEPFQPAFR DFGTDRLQLE TDLRRAIERK ELSMVYQPIA RLEDVEVAGF EALMRWEHPK RGNIPPSEFI PIAEASDLIG PLGMFALEQA TNDLMSWQHQ TGELPIFVSI NLSSVQLLNN ELYDDVRSVL AKTHCQPSRL KLELTESMVM ENPEQARLVL QKLKEAGIGL ALDDFGTGYS SLAYLTRFPF DTIKLDKTLV RDSSDKKAIV LRSVISMARE LDMKVVAEGI ESNEDAIELA KMGCNYGQSY LFGPPIPSES VLRLLRDRFP LTKRA
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