Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_0673 |
Symbol | |
ID | 8011848 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | + |
Start bp | 704430 |
End bp | 705122 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644823263 |
Product | polar amino acid ABC transporter, inner membrane subunit |
Protein accession | YP_002974516 |
Protein GI | 241203420 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0777589 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0871939 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCGATT CCGAAGTCCT TCTTCCCGAT CTCTGGGACA TCCTTGGCGC GGTCCCGGTG ACGCTCGCCA TGGCGCTTGG CATCTTCGTT TTCTCTACGA TCGTCGGCAG CCTTTTCGCG ATGGTGGAAT ATCGGCGAGT CCCGCTGCTT CGGGAACTGG TCGTCGCCTA CAAGGTCGTC TTCAAGGGCG TTCCGATGGT CATCGTGATC TTCCTCGCCT ATTACGGCCT GCCGCCGACG CTGCAGTTTC TGACCTCGCT CGTCGGCATC GACTATAATG GTCACTCGAC GCCGAACTGG ATCACGCTGA TCGTCGCCCT GACCGCCTGC GTCGCGGCGT TCCAGGCGGA AGTCGTGAAG GGCGCACTCA ACTCCTTCGA CAACGGTCAG GCCGATGCGG CCTATTCCCT GGGCTACAAG CGCAGCCAGG TGTTCCGCCG GGTCATGCTG CCTCAGGTCA TCGTCGCAGC CATCCCGGAT CTTGCCAACT CGATCATGGT GATCATGAAG GCGCTGTCGC TGGGATTTGC AATCGAGGTC GTCGACATCT TCGCGCAGTC ACAGCTGACC GCGGCGCTGA ACTTCTACTA CCTCGAAGCC TTCCTGATCG CGGTCGTCAT CTACATGGTG ATCGCCTACA TCGTCACCTA CGCTGCCGAT CGTATGGAAC GGGCTCTGAG GGTATGGGCC TAA
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Protein sequence | MFDSEVLLPD LWDILGAVPV TLAMALGIFV FSTIVGSLFA MVEYRRVPLL RELVVAYKVV FKGVPMVIVI FLAYYGLPPT LQFLTSLVGI DYNGHSTPNW ITLIVALTAC VAAFQAEVVK GALNSFDNGQ ADAAYSLGYK RSQVFRRVML PQVIVAAIPD LANSIMVIMK ALSLGFAIEV VDIFAQSQLT AALNFYYLEA FLIAVVIYMV IAYIVTYAAD RMERALRVWA
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