Gene Rleg_0673 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_0673 
Symbol 
ID8011848 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp704430 
End bp705122 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content60% 
IMG OID644823263 
Productpolar amino acid ABC transporter, inner membrane subunit 
Protein accessionYP_002974516 
Protein GI241203420 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0765] ABC-type amino acid transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0777589 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0871939 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGATT CCGAAGTCCT TCTTCCCGAT CTCTGGGACA TCCTTGGCGC GGTCCCGGTG 
ACGCTCGCCA TGGCGCTTGG CATCTTCGTT TTCTCTACGA TCGTCGGCAG CCTTTTCGCG
ATGGTGGAAT ATCGGCGAGT CCCGCTGCTT CGGGAACTGG TCGTCGCCTA CAAGGTCGTC
TTCAAGGGCG TTCCGATGGT CATCGTGATC TTCCTCGCCT ATTACGGCCT GCCGCCGACG
CTGCAGTTTC TGACCTCGCT CGTCGGCATC GACTATAATG GTCACTCGAC GCCGAACTGG
ATCACGCTGA TCGTCGCCCT GACCGCCTGC GTCGCGGCGT TCCAGGCGGA AGTCGTGAAG
GGCGCACTCA ACTCCTTCGA CAACGGTCAG GCCGATGCGG CCTATTCCCT GGGCTACAAG
CGCAGCCAGG TGTTCCGCCG GGTCATGCTG CCTCAGGTCA TCGTCGCAGC CATCCCGGAT
CTTGCCAACT CGATCATGGT GATCATGAAG GCGCTGTCGC TGGGATTTGC AATCGAGGTC
GTCGACATCT TCGCGCAGTC ACAGCTGACC GCGGCGCTGA ACTTCTACTA CCTCGAAGCC
TTCCTGATCG CGGTCGTCAT CTACATGGTG ATCGCCTACA TCGTCACCTA CGCTGCCGAT
CGTATGGAAC GGGCTCTGAG GGTATGGGCC TAA
 
Protein sequence
MFDSEVLLPD LWDILGAVPV TLAMALGIFV FSTIVGSLFA MVEYRRVPLL RELVVAYKVV 
FKGVPMVIVI FLAYYGLPPT LQFLTSLVGI DYNGHSTPNW ITLIVALTAC VAAFQAEVVK
GALNSFDNGQ ADAAYSLGYK RSQVFRRVML PQVIVAAIPD LANSIMVIMK ALSLGFAIEV
VDIFAQSQLT AALNFYYLEA FLIAVVIYMV IAYIVTYAAD RMERALRVWA