Gene Rleg_0672 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_0672 
Symbol 
ID8015468 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp703703 
End bp704410 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content61% 
IMG OID644823262 
Productpolar amino acid ABC transporter, inner membrane subunit 
Protein accessionYP_002974515 
Protein GI241203419 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0765] ABC-type amino acid transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.24546 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.295928 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACCTAT CCATCATGAT CCCCGAGCTG CTCAAGGCGC TGCCGCTGAC GCTTGCGATC 
ACGTTCACGG CCATGATCGT CGGCTTCCTG CTGGCCCTGA TAACGACGAC GTTCCGGGTG
CGCAGGATAC CGGTTGTCAG CCAGCTGGCC GACCTCTACG TCTCCTATGC CCGGAGCGTC
CCCGTCGTGC TCCAACTGTT CGTCGCCTTC TACGGACTGC CGCTGGTCGT CGCTCTGTTC
GAGGTCGAGG ATTTCGTGTC CCCGAACGTC GCGGCGATCG TCGGCCTCAG CCTCTACCAT
GGAGGCTATC TTTCCGAGGT TCTGCGGCCA GCCTACCTCG CCGTGGAACG CGGTCAGCAC
GATGCTGCGG ACAGTCTCGG ATACACCTTC CTTCAGAAGA TCCTTCGGGT CGTCGGACCC
CAGGCAGTGC ACATCGCCCT GCCAGGCTAC GGCAACTCGA TCATCTACCT CATCCACAAC
GTCGCACTGG TGATGTACAT CGGCGCCGCG GATGTCATGG CCACCGCCCA TCTCGTCATG
GAGCGCGACT ACAACCAGTA CCAGTTCGAG ACCTACCTTG TGCTGGCGGT GATCTATTCG
CTGCTATGCC TCGTGGCATG GATCGTCGTG CGCTTTTTCG AAACGCGAAA CGCAAGATTC
GCGCCCAATA CCGCACCGGC CAAGGCCACG ATGATGGCAA GCGTCTGA
 
Protein sequence
MDLSIMIPEL LKALPLTLAI TFTAMIVGFL LALITTTFRV RRIPVVSQLA DLYVSYARSV 
PVVLQLFVAF YGLPLVVALF EVEDFVSPNV AAIVGLSLYH GGYLSEVLRP AYLAVERGQH
DAADSLGYTF LQKILRVVGP QAVHIALPGY GNSIIYLIHN VALVMYIGAA DVMATAHLVM
ERDYNQYQFE TYLVLAVIYS LLCLVAWIVV RFFETRNARF APNTAPAKAT MMASV