Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_0672 |
Symbol | |
ID | 8015468 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | + |
Start bp | 703703 |
End bp | 704410 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644823262 |
Product | polar amino acid ABC transporter, inner membrane subunit |
Protein accession | YP_002974515 |
Protein GI | 241203419 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.24546 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.295928 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGACCTAT CCATCATGAT CCCCGAGCTG CTCAAGGCGC TGCCGCTGAC GCTTGCGATC ACGTTCACGG CCATGATCGT CGGCTTCCTG CTGGCCCTGA TAACGACGAC GTTCCGGGTG CGCAGGATAC CGGTTGTCAG CCAGCTGGCC GACCTCTACG TCTCCTATGC CCGGAGCGTC CCCGTCGTGC TCCAACTGTT CGTCGCCTTC TACGGACTGC CGCTGGTCGT CGCTCTGTTC GAGGTCGAGG ATTTCGTGTC CCCGAACGTC GCGGCGATCG TCGGCCTCAG CCTCTACCAT GGAGGCTATC TTTCCGAGGT TCTGCGGCCA GCCTACCTCG CCGTGGAACG CGGTCAGCAC GATGCTGCGG ACAGTCTCGG ATACACCTTC CTTCAGAAGA TCCTTCGGGT CGTCGGACCC CAGGCAGTGC ACATCGCCCT GCCAGGCTAC GGCAACTCGA TCATCTACCT CATCCACAAC GTCGCACTGG TGATGTACAT CGGCGCCGCG GATGTCATGG CCACCGCCCA TCTCGTCATG GAGCGCGACT ACAACCAGTA CCAGTTCGAG ACCTACCTTG TGCTGGCGGT GATCTATTCG CTGCTATGCC TCGTGGCATG GATCGTCGTG CGCTTTTTCG AAACGCGAAA CGCAAGATTC GCGCCCAATA CCGCACCGGC CAAGGCCACG ATGATGGCAA GCGTCTGA
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Protein sequence | MDLSIMIPEL LKALPLTLAI TFTAMIVGFL LALITTTFRV RRIPVVSQLA DLYVSYARSV PVVLQLFVAF YGLPLVVALF EVEDFVSPNV AAIVGLSLYH GGYLSEVLRP AYLAVERGQH DAADSLGYTF LQKILRVVGP QAVHIALPGY GNSIIYLIHN VALVMYIGAA DVMATAHLVM ERDYNQYQFE TYLVLAVIYS LLCLVAWIVV RFFETRNARF APNTAPAKAT MMASV
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