Gene Rleg_0635 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_0635 
Symbol 
ID8015463 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp671287 
End bp672324 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content65% 
IMG OID644823225 
Productpolysaccharide deacetylase 
Protein accessionYP_002974478 
Protein GI241203382 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0726] Predicted xylanase/chitin deacetylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.297931 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGGAC AATTCAAGCG ATTGGGCAAG CGACTGGCGA TCGGCGCCGG GCTCGAGTTT 
TCCTGGCTGC TGGCCTCGGC CGGGCTGATG CGCGAAGCAC GCGGGCGCGG CGTGGTCTTC
ACGCTGCATC ATGTCCGCCC GCACGTGGCC GAAGCCTTCG AGCCGAATGC GCATCTTGAA
ATCACCCCGC GGTTTCTCGA CGTGGCGCTG CGGCGGCTGA GGCGAGAGGG CTATCGCTTC
GTGCCGCTCG CCGAGGTGCC GGCGCTGCTG GCGGAGCCGG AAGGCGCAAA GCCTTTCGCG
GCCTTCACGC TTGACGACGG GTACAACAAC AATCTGGAAC ATGCGCTGCC GGTGTTCGAG
CGGCATCAGG CGCCGTTCAC GGTATTCGTC GCCAAGGGTT TTGCCGAAGG CTCTCACAGC
ATCTGGTGGG AAACGCTGGC GATCCTCCTG CGCCGGGCGG CCGAAATCCG TTTCGATTTC
GGCCGCGGCA TGGAGCGCCT TGTGCTCGAT AGCCCGCAAC AGCAATGGCA CGCCTTCGAT
CGCTTTGCCG CCTACGTCCA CCGCTCCGAC GAGGCGCGCG CCGTTGCCGC CATCGATCTG
CTGGCGCGCG AAAACGGCAT CGAGCCGACG GATATCGTCC GCGAACTGGT AATGGGCCCT
GGCCAATTGC AATGGCTGGC GGCACATCCG CTCGCAACGC TCGGCGCCCA TACGATCAGC
CATCGGGCGC TCGCCCGGCT GCCGGAAGCC GAAGCGCGAA TCGAAATGCA AGCTTCGGCG
GATTACCTCG AGGCGGTGAC CGGTATTCGT CCCGAGACGA TCGCCTATCC TTACGGCACG
CCTGCGGCTG CGACCGCCCG CGAGGCGCGC ATCGCTCGCA ATCTCGGCTT TACCCTTGCG
GTCACCACGC AGCCCGGGTT GCCGGCAGCG AAGCTGACCG GCTATCTCCC GCGCATTTCG
CTCAACGGAT TCTACCAGAA GCGACGTTAC GTCTCGGCTC TCGCCTCCGG CATACCGCTG
AAGATGATGG GCCGATAA
 
Protein sequence
MTGQFKRLGK RLAIGAGLEF SWLLASAGLM REARGRGVVF TLHHVRPHVA EAFEPNAHLE 
ITPRFLDVAL RRLRREGYRF VPLAEVPALL AEPEGAKPFA AFTLDDGYNN NLEHALPVFE
RHQAPFTVFV AKGFAEGSHS IWWETLAILL RRAAEIRFDF GRGMERLVLD SPQQQWHAFD
RFAAYVHRSD EARAVAAIDL LARENGIEPT DIVRELVMGP GQLQWLAAHP LATLGAHTIS
HRALARLPEA EARIEMQASA DYLEAVTGIR PETIAYPYGT PAAATAREAR IARNLGFTLA
VTTQPGLPAA KLTGYLPRIS LNGFYQKRRY VSALASGIPL KMMGR