Gene Rleg_0627 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_0627 
Symbol 
ID8011808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp661784 
End bp662881 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content64% 
IMG OID644823217 
Productchorismate synthase 
Protein accessionYP_002974470 
Protein GI241203374 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0082] Chorismate synthase 
TIGRFAM ID[TIGR00033] chorismate synthase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0254313 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCACA ATACATTCGG TCACCTCTTC CGCGTAACCA CCTGGGGCGA AAGCCATGGT 
CCGGCGCTCG GCTGCGTCGT CGACGGCTGC CCTCCGGGGC TCAGCTTCAA GCTCAAGGAC
CTGCAGGTCT GGCTCGACAA GCGCAAGCCC GGCCAATCCC GCTTCGTGAC GCAGCGGCGC
GAGGACGATC TGGTGAAGAT ACTATCAGGC GTCATGCTCG ACGCCGACGG CGAGACGATG
ACGACCACCG GCACGCCGAT CTCGATGCTG ATCGAAAATA CCGACCAGCG CTCCAAGGAT
TACGGCGAGA TCGCGAAACA ATACCGCCCC GGCCATGCCG ATTATACCTA CGACCTCAAA
TACGGCATTC GCGACTATCG CGGCGGCGGC CGCTCCTCGG CGCGCGAGAC CGCTGCGCGG
GTTGCCGCCG GCGGCATCGC CCGCCTTGTC GTACCAGGCG TTACCGTGCG CGGCGCGCTG
GTGCAGATCG GCAAGTACAA GATCAACCGC CGCAACTGGG ACTGGGACCA GGTCGATCAG
AACCCGTTCT TCTCGCCCGA TGCGGCGATC GTGCCGGTCT GGGAGGAATA TCTCGACGGC
GTCCGCAAGA AGGGCTCCTC GATCGGCGCG GTCATCGAGG TGATTGCCGA AGGTGTGCCG
GCCGGCCTCG GCGCGCCGAT CTATGCCAAG CTCGATCAGG ACATCGCCTC GCTGCTGATG
TCGATCAACG CCGTCAAGGG CGTCGAGATC GGCAATGGTT TTGCCGCCGC CGAAACGTCA
GGCGAAGACA ATGCCGACGA GATGCGCATG GGCAATGACG GCACGCCGAT CTTCCTTTCC
AACAATGCCG GCGGTATTCT CGGCGGCATC TCCACCGGGC AGCCGGTGGT GGCGCGTTTC
GCCGTCAAGC CGACCTCCTC GATCCTGACC GAACGCCAGT CGATCGATGC GGAGGGCAAG
AATGTCGATA TCCGCACCAA GGGCCGGCAC GATCCCTGCG TTGGCATCCG CGCCGTGCCG
ATCGGCGAGG CGATGGTCGC CTGCGCCGTC GCCGACCATT ATCTTCGCGA CCGCGGCCAG
ACCGGCCGTC TGAAATAG
 
Protein sequence
MSHNTFGHLF RVTTWGESHG PALGCVVDGC PPGLSFKLKD LQVWLDKRKP GQSRFVTQRR 
EDDLVKILSG VMLDADGETM TTTGTPISML IENTDQRSKD YGEIAKQYRP GHADYTYDLK
YGIRDYRGGG RSSARETAAR VAAGGIARLV VPGVTVRGAL VQIGKYKINR RNWDWDQVDQ
NPFFSPDAAI VPVWEEYLDG VRKKGSSIGA VIEVIAEGVP AGLGAPIYAK LDQDIASLLM
SINAVKGVEI GNGFAAAETS GEDNADEMRM GNDGTPIFLS NNAGGILGGI STGQPVVARF
AVKPTSSILT ERQSIDAEGK NVDIRTKGRH DPCVGIRAVP IGEAMVACAV ADHYLRDRGQ
TGRLK