| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_0619 |
|---|
| Symbol | |
|---|
| ID | 8011802 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | - |
|---|
| Start bp | 654372 |
|---|
| End bp | 655511 |
|---|
| Gene Length | 1140 bp |
|---|
| Protein Length | 379 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 644823209 |
|---|
| Product | PAS/PAC sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_002974462 |
|---|
| Protein GI | 241203366 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0923552 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.109315 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGGTG CCGATACGCA AATCTTCATG CCGGCTGAGG ACCTCGAGGA CTTGTACGAA
AACGCGCCAT GCGGCTATCT TTCGCTGCAG CCGGACGGGC GCATCGTCAA GGTCAACCGA
ACGCTGTCGA CCTGGATCGG CATCCCTGCC GAGCAACTCC TCGGCAAACG ACTTCACGAC
CTGCTCAACA CGTCGGGCCG TATATTCTAC GAGACCCATT TTGCGCCTTT GCTGCGCATG
CAAGGGTTTT TCAACGAGGT GGCCCTCGAT CTTGTGACCG TGGACGGCAG AAAGCTGCCT
GTGCTCGCCA ATGCCGTGGA AAGACGTGCC GAAGACGGCG CCCTGCTTTT CACCCGCGTG
ACGATGTTCC AGGCTGCCGA GCGTCGCCGC TATGAACGGG AGCTGGTCGA TGCGCGCACA
GCCGCCGATG CTGCCGGCGC CACGATCAAA TCCAAACTCG CCTTTGAACA GCAAACCGCC
GAGTTGCGGG AAGAATTCAT TGCTGTTCTC GGCCACGACC TGCGCAACCC GCTTGCCTCG
ATTGCAGCCG CGGCGCGCAT GCTGCGAAAA GAGAAGCAGA CCGATCGGGC GATTAAAGTG
CTCGATTTGA TGCAGGGCAG CGTCGTTCGC ATGTCAGCCC TGATCGATAA CGTCCTCGAC
TTCGCGCGCG GACGATTGGG TGGCGGCATC ACGCTCGAGA GGCGGGCGGA GCATCTCGAG
CCGCTCTTGC GGCAGGTCAT CGAAGAACTT CGCTTCAGTC ACCTCGACCG CGGGATTGAG
GTGACGATCG AATTCGATGG GCCGATAAAC TGCGACAGCG GCCGGATCGG CCAGCTGGTG
TCCAATCTTC TGGGAAATGC CCTGACCCAT GGCACACCGG ACGAACCGGT GCGGCTCTCG
GCGGCAACTG TCGACGGAAG GTTGGAGCTT TGGATCGCCA ATGGCGGCGC TCCGATTTCC
AGCGACGCGA TGACACGGCT TTTTCAGCCT TTCTTCACAG GCGAAGCCGG CACAAGTCAA
AGAGGATTGG GGCTGGGTCT GCACATCGCT TCGGAAATCG CCCGCGCCCA CGGCGGGACG
ATCACGGTCA GTTCCGATGA CAAGGAGACG CGCTTCACCT TTGTAATGCC GTTGGATTGA
|
|---|
| Protein sequence | MTGADTQIFM PAEDLEDLYE NAPCGYLSLQ PDGRIVKVNR TLSTWIGIPA EQLLGKRLHD
LLNTSGRIFY ETHFAPLLRM QGFFNEVALD LVTVDGRKLP VLANAVERRA EDGALLFTRV
TMFQAAERRR YERELVDART AADAAGATIK SKLAFEQQTA ELREEFIAVL GHDLRNPLAS
IAAAARMLRK EKQTDRAIKV LDLMQGSVVR MSALIDNVLD FARGRLGGGI TLERRAEHLE
PLLRQVIEEL RFSHLDRGIE VTIEFDGPIN CDSGRIGQLV SNLLGNALTH GTPDEPVRLS
AATVDGRLEL WIANGGAPIS SDAMTRLFQP FFTGEAGTSQ RGLGLGLHIA SEIARAHGGT
ITVSSDDKET RFTFVMPLD
|
|---|
| |