| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_0611 |
|---|
| Symbol | |
|---|
| ID | 8011794 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | - |
|---|
| Start bp | 643892 |
|---|
| End bp | 644827 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644823201 |
|---|
| Product | histone deacetylase superfamily |
|---|
| Protein accession | YP_002974454 |
|---|
| Protein GI | 241203358 |
|---|
| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.240972 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACCC GTCTTTATGA ACACCCGATC TTCCTGGAAC ATGTCACGCC CGCCGGCCAT
CCGGAGCGAT CGGACAGGAT CCGCGCCATC AACGTCGCGC TGGAACATCC GAATTTCGAG
CGGCTGGAGC GCCGCCAGGC GCCGCAGGCG AATGAGGATG CGGTGTTGCT TGCCCATCCC
GAAGAACATC TGATCGCCGT CATGCGGGAG ATCCCCGAGG AAGAGGGTGA GATCAACCAG
ATCGAAGCCG ATACCTATGC CAGCAGCAAG AGCCTGCAGG CGGCGCTGAC CGGCATTGGC
GGGGCGATGG CGGCGGTCGA CGACGTCTTT ACCGGCCGGG CCGACAATGT CTTCGTCGCC
GCTCGCCCGC CGGGGCACCA TGCCGAGAAG ATGACGGCGA TGGGCTTCTG CTTCTTCAAC
AATGCGGCGA TCGCCGCCCG GCATGCGCAG AAAACGCATG GCGCCGAGCG CATCGCCATC
GTCGACTGGG ACGTGCACCA CGGCAACGGC ACGCAGGATA TCTTCTGGGA CGATCCTTCC
GTGCTGTTCT GCTCGACGCA TCAGATGCCG CTCTATCCCG GCACCGGCGC CAAGGATGAA
AAGGGCAAGC ACAACACCAT CGTCAATGCG CCGCTGTCGC CGAATGTCGG CAGCGATCAC
TTTCGCGAGG CATTCAAATC GCGCGTCCTG CCTGCCCTTG ACGATTTCCG GCCGGATCTC
ATCATCATCT CCGCCGGCTT CGACGCGCAT CACCGCGATC CGCTGGCGCA GATCAATCTG
ACCGGCGAGG ATTTCGACTG GGCGACCGGG CGCGTGCTGG AACTCGCAGA CCGATACGCG
AAGAACCGGG TCGTCAGCCT GCTCGAAGGC GGTTATGATC TCGAGGGACT CGCCGAATCG
GCGGGCATGC ATATTCTGAG AATGATGAAG GGTTGA
|
|---|
| Protein sequence | MSTRLYEHPI FLEHVTPAGH PERSDRIRAI NVALEHPNFE RLERRQAPQA NEDAVLLAHP
EEHLIAVMRE IPEEEGEINQ IEADTYASSK SLQAALTGIG GAMAAVDDVF TGRADNVFVA
ARPPGHHAEK MTAMGFCFFN NAAIAARHAQ KTHGAERIAI VDWDVHHGNG TQDIFWDDPS
VLFCSTHQMP LYPGTGAKDE KGKHNTIVNA PLSPNVGSDH FREAFKSRVL PALDDFRPDL
IIISAGFDAH HRDPLAQINL TGEDFDWATG RVLELADRYA KNRVVSLLEG GYDLEGLAES
AGMHILRMMK G
|
|---|
| |