Gene Rleg_0604 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_0604 
Symbol 
ID8011788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp635308 
End bp636054 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content65% 
IMG OID644823194 
Producthemolysin A 
Protein accessionYP_002974447 
Protein GI241203351 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1189] Predicted rRNA methylase 
TIGRFAM ID[TIGR00478] hemolysin TlyA family protein 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.30581 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.619961 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGATC AAAACACCCA ACGTCTCGAC CAGCTTCTCG TCTCCCTCGG CCTCTTTGCC 
AGCCGCTCAC GCGCCCGCGA CGCCGTGCAG CGCGGCACCG TCAAGATCGG CGGCCAGGTG
GTCACGAAGG CCGGCGCGCT GTTTGGCGCG GACGCGGCCA TCGAGATCGA CGATCCGGCG
CAGGACTATG TGTCGCGCGC CGCACTGAAG CTTGCCGCTG CCCTCGATCA TTTCCGGCTC
GATCCTGCCG GCCATCACTG TCTCGATGTC GGTGCCTCCA CCGGCGGCTT CACCGAGGTG
CTGCTGCAGC GCGGTGCCGC GCATGTCACC GCGATCGATG TCGGCCATGG GCAGATGCAT
CCGCGCATAT CAGGCGATCC GCGCGTGACG AACAGGGAGG GCCTCAACGC CCGCAACCTG
ACGGCAGACG ATATCGACCA TCCCTCCACC TTCATCGTTT CCGACGTCTC CTTCATCACG
CTGAAGCTGG CGCTCGCGCC GGCTCTTGAG ATCGCCGAAC CGGGCGCTGT CGCCGTGCTG
CTGGTCAAGC CGCAGTTCGA GGCCGGGCGC GAAGCGATCG GCAAGGGCGG GATGCTGAAG
GACCCCTCGT CTGCTCCCGC CGTTGCTGCA GAACTGGAGC GCTGGTTCGT CGAGGACATG
GGCTGGAAAA GCCTCGGCCT CATCCCCTCC CCGATTTCCG GCGGCGACGG CAATCAGGAA
TTCCTTCTGG CAGGATTAAA ACCGTGA
 
Protein sequence
MSDQNTQRLD QLLVSLGLFA SRSRARDAVQ RGTVKIGGQV VTKAGALFGA DAAIEIDDPA 
QDYVSRAALK LAAALDHFRL DPAGHHCLDV GASTGGFTEV LLQRGAAHVT AIDVGHGQMH
PRISGDPRVT NREGLNARNL TADDIDHPST FIVSDVSFIT LKLALAPALE IAEPGAVAVL
LVKPQFEAGR EAIGKGGMLK DPSSAPAVAA ELERWFVEDM GWKSLGLIPS PISGGDGNQE
FLLAGLKP