Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_0577 |
Symbol | |
ID | 8011764 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | + |
Start bp | 599919 |
End bp | 601853 |
Gene Length | 1935 bp |
Protein Length | 644 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644823167 |
Product | hypothetical protein |
Protein accession | YP_002974420 |
Protein GI | 241203324 |
COG category | [S] Function unknown |
COG ID | [COG4907] Predicted membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.464541 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGGCGTC GGTTTTTCGG ATTTTGCTTT GCACTGCTGT TGATGCTCGC CGCCCCGGCG GCCTTTGCCG CCGAGGTGAT CGACAGTTTT GCCTCCGACA TTACGCTCGA AAAAAGCGGT GCGATGACGG TGACGGAAAC GATCACCGTC AATGCCGAAG GCAATCAGAT CAACCACGGC ATCTTCCGTG ATTTCCCGCT CTATTTCACC GATGCCGCGG GTCGCCGCCG CAGCGTCGAT TTCGATATGG TGTCGGTCCA GCGCGACGGC GATAACGAGC CCTGGCACAC TGAATCGATA TCAGGCGGCA TCCGCATCTA TGCCGGTTCT GCCGACGTGA CCGTGACGCC GGGCCGTCAT CGATACGTCT TCACCTACAG GACCAATCGC CAGATCCGCT ATTTCGACGA TCATGACGAA CTCTATTGGA ACGTCACCGG CAACGGCTGG ATCTTCCCGA TCCGCTCGGC CACGGCGACG GTGAAGCTGC CGCCTGATGT CGGCGCGACG GAGACGACCT TCTTCACCGG CCCTGAGGGA GCCACCGGAA AGAATGCCCG CGTCAGCGAG AGCGGCGCTG GCTTGGTCTT TTCCACCACC GCGCCGCTTG ATGCCTACGA AGGCCTGACC TTTGCGATTC GCATGCCGAA GGGGTCTATC GATCCGCCGA GCGCGGATAT GGAAAGCACC TGGTGGCTGA AGGACAACCG CAATTATTTC ATCGGCTTCG GCGGTCTGCT CCTGGTTTTG GCATATTACA CGCGCTCCTG GCTGAAGGTC GGCCGCGATC CTGCCCGTGG CGTCGTCGTG CCGCGCTGGG ACGCGCCTGA TGGTATCTCG CCGGCGCTGG TCAACTATAT CGACAATAAG GGCTTCTCCG GCGAGGGCTG GACGGCGCTG TCCGCCACCG CGCTCAATCT TGCCGTCCGC GGTTACGTCA AGCTCGAAGA CCTGAAGAAT TCGATTGTCA TTCAAGGCAC CGGCAAGCCA CTCGGCAAGG AGAAATTCCA GGCCGGCGAA ATCGAATTGC TGAAGGTCGC CGGCGGCGCC GGTTCGACGC TGACGATCGA CAAGGCCAAT GGCGAGCGGG TGAAGTCCGT CGGCCAGGCC TTTCGCTCGG CGATCGAGAA AGAACATCGC GGCAAATATT ACAATTCCAA CCTCGGCTAT ACCGCCGGCG GCATCGTGCT CAGCGCCGCA GCCCTAGTGA TCCTGTTCGT CTTCGGTTCG CTGGCGCCGG ATACCATCGC GCTGATGCTG ATCCCGATCG CCATTTCGGT CTTCGTTGCG GTGTTCGCCG CCGGCCTCGT CAGGTCGCTG CATCGCGGCA AGTCGCTGTT CGGTAAGATC ATCGCCATCA TCTCCGCCGC GATCGGCGTC TTCGTCGGCA TCAGCATCCT GGCGACCATG GTGCTGGCGC TTGCCTCGTC GCTGGTGGAA CTGCACGAAA CGCCGATGCT GTTTGCCGTC GGCGGCATCG TGCTGCTCAA CATCCTCTAT GTCTTCATCA TGGGTGCACC GACCCCGCTC GGCGCCAAGA TGATGGATGG CATAGACGGC CTGCGCCAAT ATCTGACGCT TGCCGAGAAG GACCGGATGA ACACGGCCGG CGCCCCGGAA ATGTCGCCAC GGCATTTCGA GACGCTGCTG CCCTATGCGG TGGCGCTCGG CGTCGAAAAA CCCTGGTCAC GCACCTTCGA GACCTGGCTT GCTGCAGCCG CTGCCGGTGC GGCTGCAGCC TATGCGCCCG CCTGGTATGC CGGCAATTTC AACAGCGGCA GCTTTTCCGA TCGTATCGGT GGTTTTTCCT CGTCCATGGC CTCGACCATC GCGTCGACGA TACCCGCGCC GCCGCCCTCA AGTTCATCCT CCGGTTTTTC CGGCGGCGGC TCGTCCGGCG GCGGTGGCGG AGGTGGGGGA GGCGGGGGCT GGTAA
|
Protein sequence | MGRRFFGFCF ALLLMLAAPA AFAAEVIDSF ASDITLEKSG AMTVTETITV NAEGNQINHG IFRDFPLYFT DAAGRRRSVD FDMVSVQRDG DNEPWHTESI SGGIRIYAGS ADVTVTPGRH RYVFTYRTNR QIRYFDDHDE LYWNVTGNGW IFPIRSATAT VKLPPDVGAT ETTFFTGPEG ATGKNARVSE SGAGLVFSTT APLDAYEGLT FAIRMPKGSI DPPSADMEST WWLKDNRNYF IGFGGLLLVL AYYTRSWLKV GRDPARGVVV PRWDAPDGIS PALVNYIDNK GFSGEGWTAL SATALNLAVR GYVKLEDLKN SIVIQGTGKP LGKEKFQAGE IELLKVAGGA GSTLTIDKAN GERVKSVGQA FRSAIEKEHR GKYYNSNLGY TAGGIVLSAA ALVILFVFGS LAPDTIALML IPIAISVFVA VFAAGLVRSL HRGKSLFGKI IAIISAAIGV FVGISILATM VLALASSLVE LHETPMLFAV GGIVLLNILY VFIMGAPTPL GAKMMDGIDG LRQYLTLAEK DRMNTAGAPE MSPRHFETLL PYAVALGVEK PWSRTFETWL AAAAAGAAAA YAPAWYAGNF NSGSFSDRIG GFSSSMASTI ASTIPAPPPS SSSSGFSGGG SSGGGGGGGG GGGW
|
| |