Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_0543 |
Symbol | |
ID | 8011734 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | - |
Start bp | 566803 |
End bp | 567690 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644823133 |
Product | SMP-30/Gluconolaconase/LRE domain protein |
Protein accession | YP_002974386 |
Protein GI | 241203290 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3386] Gluconolactonase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGATA TTTATGAGTT CGAGGGCAAA ACACTTTGCA ATACCAATTC CGTTCTCGGT GAAGGTCCGA CCTATGATCC GGACAGCAAT ACCGTTTGGT GGTTCAACAT CCTCGGCAAG GAACTGCACG AGCTCAATCT CTCGACGGCC GCGAAAAAGG TGCATCCGCT GCCTGTGATG GCGAGCGTGC TTGCCCGCAT CGATGCCGGG CGGCAGCTGA TCGCGACGGA GGAAGGGCTT TTCGTGCGCG ATGTGGCAAG CGGCAACCTC ACCTTCTACG CCGCCCTCGA AAACGACAGG CCGGAAAACC GTTCGAACGA CGGCCGCACC CACCCGTCCG GCGCGCTCTG GATCGGCACG ATGAGCAAGC GGGCGGAAAA CCAGGCCGGC GCCATCTATC ATGTCGCGAG CGGCAAGGTG ACGAAGATCT TCAACGGCAT CAGCATCCCG AATTCGATCT GCTTCTCGCC TGACGGCACG GTTGGCTATT ATACGGATTC CCGCATCAAC CGGCTGATGC GCGTTATGGT CGATCCGTTG ACCGGCCTGC CCTCGGGCGA GCCGATCGTG CTCGTCGACA GCATGGACGA CCCCGGCAGC ATCGACGGCT CGGTCGTCGA TGCCGACGGC TATCTGTGGA ATGCGCGCTG GGGCGCCGGC GTCGTCGACC GCTATAGTCC GGACGGTCTG CGCATCTCGC GCTATATGGT TCCTGCCGTC CAGCCGTCCT GCCCTGCCTT CATCGGCGTC AATGCCGACC GGCTGGCGGT GACGACTGCC TGGGAAGGGC TCGACGAGGA TGCGCGGTCG GCGCAGCCGA GCGCCGGCGC GCTGCTGGAA CTCGGCATCG ACGTCAAAGG CGTGTTCGAT CCCGTCTATG TAATCTGA
|
Protein sequence | MTDIYEFEGK TLCNTNSVLG EGPTYDPDSN TVWWFNILGK ELHELNLSTA AKKVHPLPVM ASVLARIDAG RQLIATEEGL FVRDVASGNL TFYAALENDR PENRSNDGRT HPSGALWIGT MSKRAENQAG AIYHVASGKV TKIFNGISIP NSICFSPDGT VGYYTDSRIN RLMRVMVDPL TGLPSGEPIV LVDSMDDPGS IDGSVVDADG YLWNARWGAG VVDRYSPDGL RISRYMVPAV QPSCPAFIGV NADRLAVTTA WEGLDEDARS AQPSAGALLE LGIDVKGVFD PVYVI
|
| |