Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_0535 |
Symbol | |
ID | 8011727 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | - |
Start bp | 558179 |
End bp | 559084 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644823126 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_002974379 |
Protein GI | 241203283 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.32739 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACTCG GTTGGCTAGA AGACTTCATG GAACTCGCGG CCGTGCGGAA CTTTTCTACC GCCGCAGCGG CCCGACATGT GACGCAGCCC GCCTTCAGCC GCAGAATAAG GGCGCTGGAA AACTGGATCG GCGCCGCGCT GATCGATCGC AGCTCCTATC CGGTCAGGCT AACGAACGCC GGGGAGACGT TTCTCGAGTC GAGCCGTGAG TTGATGCGCG AAATCTACCG CGTCCGCGAT GAATGCCGGC AACAGGCACG CGCCGGCATC GAGGTGCTCA CCTTCAGCGC GCTGCACACC ATCGCTCTTA GTATCTTTCC CGATCTTCTT ACGAGCGTCG AACAACGCAC CGGTCCCTTC ATAACCCGGA TGCATGCGAC GGACTTCTAC GACTGCGTAG AATCGCTTGC GCTCGGCCGC TGCGACATCG CCTTTTGCTA TTCCCACGAG TTCGGGCCAC CGGTCCTGCA GACCGGGCAG TTCTCCTCGA AGGTTATCAG AATCGATCCT TTCCACCTCG TCAGCAAGGC AGATCAACGA GGAAACCCGG TCATCGACTT GGCAACTTGG CCCGGAAACG AAGATATGCC TCTCGTCGCC TATTCATCCG ACTGCTTTCT CGGAAAAGTG CAAACTCAGC TCATGCTCGA CATGCAGAAG ACAGGGCGGA GCTTTCGAGT AACCTATGAA AACTCGATGT CGGAGTCGGT CAAGCGCATG ATTCTCGCGG GGAAAGGCAT CGGCTGGCTG CCGGAAAGCT CTGCGACCCG CGAGATAGAG CGGAACGAAC TCTGTATCGT CGACGCGCGA CAGGCTGAGG TCACCCTGAA CGTCCTCGCT ATCCGCAAGC AGGGCAGCGG CTCAGCCGCC CTCGAACGCT TCTGGTCAAA TCTGCAGGGT TTGTGA
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Protein sequence | MELGWLEDFM ELAAVRNFST AAAARHVTQP AFSRRIRALE NWIGAALIDR SSYPVRLTNA GETFLESSRE LMREIYRVRD ECRQQARAGI EVLTFSALHT IALSIFPDLL TSVEQRTGPF ITRMHATDFY DCVESLALGR CDIAFCYSHE FGPPVLQTGQ FSSKVIRIDP FHLVSKADQR GNPVIDLATW PGNEDMPLVA YSSDCFLGKV QTQLMLDMQK TGRSFRVTYE NSMSESVKRM ILAGKGIGWL PESSATREIE RNELCIVDAR QAEVTLNVLA IRKQGSGSAA LERFWSNLQG L
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