Gene Rleg_0533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_0533 
Symbol 
ID8011725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp556146 
End bp556868 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content64% 
IMG OID644823124 
ProductHAD-superfamily hydrolase, subfamily IA, variant 1 
Protein accessionYP_002974377 
Protein GI241203281 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.454785 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGCAG TGGCCTCTAT CAAAGGCATT CTCTTCGACA AGGACGGCAC GCTGCTCGAC 
TATGACGAGA GCTGGCTGCC GGTCAACCGC GAGCTTGCCC GCATCGCCGC CAGAGGGGAT
GAGCTTCTCG CCAACCGGCT GCTGTCGGCC TGCGGCATGG ATCCGGTGAC CGGCCATATC
GTTCCCGACA GCCTGCTTGC CGCCGGCAAT ACCCGTCAGA TCGCCTCAGG CCTTGTTGCC
GCGGGTTCGA TGGTGGATGT CGACGAACTG ACGGTCCGCC TCGACGACCT GTTTTCCAGT
GCCGCCGAAT TTTCCGTGCC GGTGACCGAC CTCGCCGGCT TCTTCGAGCG GCTGCATCGG
CGCGGCTTCA AGCTCGGTGT CGCCTCCAGC GACAATGAGC GGTCGATCCG CCAGACGGCG
GAACGTTTCG GTTTTGCCCG CTATATCGAT TACATCGCCG GCTACGACAG CGGTTTCGGC
GTCAAGCCGG AGCCCGGCAT GGTGCTCGGC TTCTGCGCTG CGACCGGTCT TTTGCCTGAA
GAGGTCGCCA TGGTCGGCGA TAACAATCAC GATCTGCACA TGGGTCTGAA TGCCGGCACG
GGTCTCAGGA TCGCGGTGCT GACCGGCACC GGTTCGCGGG AGACGCTTGC CGCCGCGGCC
GATCATGTGC TCGACGATAT CACCGCCATC GAGACGCTGC TGCCCGACTT GCAGCCGGCC
TGA
 
Protein sequence
MSAVASIKGI LFDKDGTLLD YDESWLPVNR ELARIAARGD ELLANRLLSA CGMDPVTGHI 
VPDSLLAAGN TRQIASGLVA AGSMVDVDEL TVRLDDLFSS AAEFSVPVTD LAGFFERLHR
RGFKLGVASS DNERSIRQTA ERFGFARYID YIAGYDSGFG VKPEPGMVLG FCAATGLLPE
EVAMVGDNNH DLHMGLNAGT GLRIAVLTGT GSRETLAAAA DHVLDDITAI ETLLPDLQPA