Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_0533 |
Symbol | |
ID | 8011725 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | + |
Start bp | 556146 |
End bp | 556868 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644823124 |
Product | HAD-superfamily hydrolase, subfamily IA, variant 1 |
Protein accession | YP_002974377 |
Protein GI | 241203281 |
COG category | [R] General function prediction only |
COG ID | [COG0546] Predicted phosphatases |
TIGRFAM ID | [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.454785 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGGCAG TGGCCTCTAT CAAAGGCATT CTCTTCGACA AGGACGGCAC GCTGCTCGAC TATGACGAGA GCTGGCTGCC GGTCAACCGC GAGCTTGCCC GCATCGCCGC CAGAGGGGAT GAGCTTCTCG CCAACCGGCT GCTGTCGGCC TGCGGCATGG ATCCGGTGAC CGGCCATATC GTTCCCGACA GCCTGCTTGC CGCCGGCAAT ACCCGTCAGA TCGCCTCAGG CCTTGTTGCC GCGGGTTCGA TGGTGGATGT CGACGAACTG ACGGTCCGCC TCGACGACCT GTTTTCCAGT GCCGCCGAAT TTTCCGTGCC GGTGACCGAC CTCGCCGGCT TCTTCGAGCG GCTGCATCGG CGCGGCTTCA AGCTCGGTGT CGCCTCCAGC GACAATGAGC GGTCGATCCG CCAGACGGCG GAACGTTTCG GTTTTGCCCG CTATATCGAT TACATCGCCG GCTACGACAG CGGTTTCGGC GTCAAGCCGG AGCCCGGCAT GGTGCTCGGC TTCTGCGCTG CGACCGGTCT TTTGCCTGAA GAGGTCGCCA TGGTCGGCGA TAACAATCAC GATCTGCACA TGGGTCTGAA TGCCGGCACG GGTCTCAGGA TCGCGGTGCT GACCGGCACC GGTTCGCGGG AGACGCTTGC CGCCGCGGCC GATCATGTGC TCGACGATAT CACCGCCATC GAGACGCTGC TGCCCGACTT GCAGCCGGCC TGA
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Protein sequence | MSAVASIKGI LFDKDGTLLD YDESWLPVNR ELARIAARGD ELLANRLLSA CGMDPVTGHI VPDSLLAAGN TRQIASGLVA AGSMVDVDEL TVRLDDLFSS AAEFSVPVTD LAGFFERLHR RGFKLGVASS DNERSIRQTA ERFGFARYID YIAGYDSGFG VKPEPGMVLG FCAATGLLPE EVAMVGDNNH DLHMGLNAGT GLRIAVLTGT GSRETLAAAA DHVLDDITAI ETLLPDLQPA
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