| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_0504 |
|---|
| Symbol | |
|---|
| ID | 8011699 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | - |
|---|
| Start bp | 525352 |
|---|
| End bp | 526056 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644823095 |
|---|
| Product | Haloacid dehalogenase domain protein hydrolase |
|---|
| Protein accession | YP_002974348 |
|---|
| Protein GI | 241203252 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.0361891 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGACGC GACCACTGAC CACGATCGGC TTCGATGCCG ACGATACACT CTGGCAGAAC
GAACAATATT ACCGGCTGAC GGAAGCCCAT TTCACCGGGC TTCTTGCCGA TTTCGCCGAA
GGACCGAAGA TTTCCGAACG GCTGCTGGAG GCCGAAAAAC GCAACCTTCG CCACTACGGC
TTCGGCATCA AGGGTTTTAC GTTGTCGATG ATCGAGACGG CGATCGAGAT CACCGAGGGC
AAGATTCCGG CCGGCGTGAT CGCCAAGATT CTCGATACCG GCCGCGAGCT CCTCTCCCAT
CCTGTCGAGA CCATGCCGCA TGTGCGCGAC ACGCTGGAGG CGCTTGCCGG CAAATACCTG
CTTGTCATGA TCACCAAGGG CGATCTCTTC GACCAGGAGC GCAAGCTCGC CCAATCGGGG
CTCGGCGACT TCTTCGATGC CGTCGAGATC GTCTCCGACA AGACGGCGGT CACCTATCGC
CGCATCTTCG CCAAGGTCGG CGACGGGCCG GAGCGGGCAA TGATGGTCGG CAATTCGCTG
AAATCGGACA TCGTGCCGGC GATCGCCGCC GGCAGCTACG GCGTCTTCGT GCCACACGAA
CTGACCTGGG TGCTGGAACA TGTGGACGAG CCGAAAGAGG CGCCGCGTTT CCGCAAGATC
GACCACCTCG GCGAATTGCG CGACCTGATC GACCGGCTCG GCTAA
|
|---|
| Protein sequence | MTTRPLTTIG FDADDTLWQN EQYYRLTEAH FTGLLADFAE GPKISERLLE AEKRNLRHYG
FGIKGFTLSM IETAIEITEG KIPAGVIAKI LDTGRELLSH PVETMPHVRD TLEALAGKYL
LVMITKGDLF DQERKLAQSG LGDFFDAVEI VSDKTAVTYR RIFAKVGDGP ERAMMVGNSL
KSDIVPAIAA GSYGVFVPHE LTWVLEHVDE PKEAPRFRKI DHLGELRDLI DRLG
|
|---|
| |