| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_0486 |
|---|
| Symbol | |
|---|
| ID | 8011681 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | - |
|---|
| Start bp | 508365 |
|---|
| End bp | 509102 |
|---|
| Gene Length | 738 bp |
|---|
| Protein Length | 245 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644823078 |
|---|
| Product | 16S ribosomal RNA methyltransferase RsmE |
|---|
| Protein accession | YP_002974331 |
|---|
| Protein GI | 241203235 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.286945 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGCCA ATTTCCGCAT GCAACGGCTT TTCGTCGATG CGCCGCTCAC GCGCGGTGCC
GGCGTGGAGG CGAATGCCGA TCAGTTCAAC TATCTCGCCA ATGTGCTGCG GATGGAGGAC
GGTGGGGAGA TCCTGCTCTT CAACGGCCGC GACGGCGAGT GGAAGGCAAC CCTTACCTTC
CCCACGCGCA AACGCATCCT TTTGACGGCA ACCGAAGAGA CGCGGCCGCA GCCGCAGCCT
TGCGACCTGC ATTATCTCTT TGCGCCGCTC AAGGTCGGCC GCATGGACTA TCTCGTGCAG
AAGGCGGTCG AAATGGGAGC CGGCCTGCTG CAGCCGGTCA TGACCCAGCA CGTTCAGGGC
AAGGTCACCA ATCTCGACAA GCTGCGCGCC AATGTCATCG AGGCGGCGGA GCAATGCGGC
ATTCTCGGCA TCCCCGACGT GGCCGAGCCG GTGAGGCTTC TCGACCTGCT CGACCGCTGG
CCGAGCGAGC GCCGCATCAT CTATTGCGAC GAGGGCGATG CCGGGCAGAA CCCGCTGCCG
GTGCTCTCGG CGATCAGGGA AAGACATCTC GCTCTGCTCG TCGGGCCGGA AGGCGGCTTT
TCGGAAGAAG AGCGGGCGCG GCTTCGAAGC CTCGATTTCG TCACGGCCAT CCCACTCGGA
CCGCGCATCC TGCGGGCCGA TACGGCAGCC GTTGCTGCCT TGGCGGTGGT CCAGGCGGCG
ATCGGCGACT GGAACTAA
|
|---|
| Protein sequence | MRANFRMQRL FVDAPLTRGA GVEANADQFN YLANVLRMED GGEILLFNGR DGEWKATLTF
PTRKRILLTA TEETRPQPQP CDLHYLFAPL KVGRMDYLVQ KAVEMGAGLL QPVMTQHVQG
KVTNLDKLRA NVIEAAEQCG ILGIPDVAEP VRLLDLLDRW PSERRIIYCD EGDAGQNPLP
VLSAIRERHL ALLVGPEGGF SEEERARLRS LDFVTAIPLG PRILRADTAA VAALAVVQAA
IGDWN
|
|---|
| |