| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_0426 |
|---|
| Symbol | dppF |
|---|
| ID | 8011628 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | + |
|---|
| Start bp | 442907 |
|---|
| End bp | 443860 |
|---|
| Gene Length | 954 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644823021 |
|---|
| Product | dipeptide transporter ATP-binding subunit |
|---|
| Protein accession | YP_002974275 |
|---|
| Protein GI | 241203179 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4608] ABC-type oligopeptide transport system, ATPase component |
|---|
| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.153009 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGACG CTGTTCTCGA GGGCAGGGAT CTCGCCCGCT TCTACACCGT CAATCGCGGT
CTGTTCAAAG CCGATGCCAC CGTCAAGGCG CTGAACGGCG TCAGCTTCAG CCTGCATTCC
GGCAAGACGC TCGCCGTCGT CGGCGAATCC GGCTGCGGCA AGTCGACGCT CGCCCGCCTG
GTCACCATGA TCGAGAACCC GACATCGGGG CAGTTACTGA TCGACGGCAA GCCCGCCCAT
GTCGGCGATC GTAGCCTGCG CAGCCAGGTG CAGATCGTTT TCCAGAATCC CTACGGCTCG
CTCAATCCGC GCCAGAAGGT CGGCTCAATC CTCGAAGAGC CGCTGAAGAT CAACACCAAT
CTCGACGGCG CCGCCCGCCG CCGCAAGGCG GAGGAGATGA TGGCTCGTGT CGGCCTGCGT
CCGGAGCATT ATGGCCGATA TCCCCATATG TTCTCCGGCG GTCAGCGCCA GCGTATCGCC
ATTGCCCGCG CCCTGATGCT GCGGCCAAAG GTGCTGGTGC TCGACGAACC GGTCTCGGCG
CTTGACCTGT CGATCCAGGC GCAGGTGCTG AACCTGCTGA TGGACCTGCA GAAGGAGATG
GGGCTCGCCT ATCTCTTCAT CTCGCACGGA CTGTCCGTCG TCCATCATAT CGCCGACGAG
GTGATGGTGA TGTATCTCGG CCGTCCCGTG GAAACCGGTC CCGCCGCCGA GGTCTTCGCC
CGGCCACGCC ATCCCTACAC GGCAGCCTTG CTGTCAGCGA CGCCGATCGC CGATCCCGAC
CGTGCGAAGA ACCGCATCCG CCTGCAGGGT GAACTGCCTT CGCCGCTGAA GCCGCCGACG
GGCTGCCACT TCAATCCGCG CTGCTGGAAG GCGCAGGACC ATTGCCGTCA GGTTTCTCCC
GAATTAAGTG GAGAAGGCAC ACATCAATAT GCCTGTCACT TCCCGCTCGA TTGA
|
|---|
| Protein sequence | MTDAVLEGRD LARFYTVNRG LFKADATVKA LNGVSFSLHS GKTLAVVGES GCGKSTLARL
VTMIENPTSG QLLIDGKPAH VGDRSLRSQV QIVFQNPYGS LNPRQKVGSI LEEPLKINTN
LDGAARRRKA EEMMARVGLR PEHYGRYPHM FSGGQRQRIA IARALMLRPK VLVLDEPVSA
LDLSIQAQVL NLLMDLQKEM GLAYLFISHG LSVVHHIADE VMVMYLGRPV ETGPAAEVFA
RPRHPYTAAL LSATPIADPD RAKNRIRLQG ELPSPLKPPT GCHFNPRCWK AQDHCRQVSP
ELSGEGTHQY ACHFPLD
|
|---|
| |