Gene Rleg_0423 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_0423 
Symbol 
ID8011625 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp439990 
End bp440994 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content60% 
IMG OID644823018 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002974272 
Protein GI241203176 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0103751 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0395583 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCGTT TTTTTATCGG CCGCCTTGCG GTGCTGATCC CGACATTCCT CGGCGTTTCC 
CTCATTGCCT TCTCGTTCAT CCGCATGCTT CCCGGCGATC CCGTCATGCT CCTGTCGGGG
GAACGCGTCA TGGCGCCGGA GCGGCACGCC CAGATCATGC ATGATCTCGG TTTCGACCGG
CCGATGTATG TGCAGTATTT CGATTATCTC GGAAAAATCC TGCATGGCGA TCTCGGCACC
TCGATCGTCA CCAAGCGGCC CGTTCTCGGC GAATTCCTGA CACTGTTTCC GGCAACGCTC
GAGCTTTCGC TCTGTGCCAT CATCCTCGCC GTCTGTCTTG GCGTGCCCGC CGGTATCTTT
GCCGCCGTCA AGCGAGGCAC GTGGTTCGAC CAAAGCGTGA TGGGTATTGC CCTTATCGGA
TATTCCATGC CGATCTTCTG GTGGGGGCTG CTGCTGATCA TCTTCTTCTC CGGCTATCTC
GGCTGGACGC CCGTTTCCGG CCGCATCTCG CTGATGTATT TCTTCAAGCC GGTCACCGGA
TTCATGCTGG TCGACAGCCT GCTGTCGGGC CAGAAGGGCG CGTTTTCCTC GGCCGTCAGC
TACCTCATTC TGCCGACGAT CGTGCTGGCG ACCATCCCGC TTGCCGTCAT CGCCCGCCAG
ACGCGTTCGG CGATGCTCGA GGTTCTGGGT GAGGATTATG TCCGCACGGC GCGCTCGAAG
GGCCTGAAGC CGCTGCGCGT CGTCGGCGTG CATGCGCTGC GCAATGCAAT GATCCCTGTC
ATCACCACCA TCGGTCTGCA GATCGGCGTT CTTCTTGCCG GCGCCATCCT CACCGAGACG
ATCTTCTCCT GGCCGGGCAT CGGCAAATGG ATGGTCGATT CGGTGTTCAA GCGCGATTAC
GCCGTGGTCC AGGGCGGTCT TCTGCTGATC GCCGGCGTCA TCATGCTGGT CAACCTGATT
GTTGATGTTC TCTACGGCTT CATCAATCCG CGCATTCGTC ATTAG
 
Protein sequence
MLRFFIGRLA VLIPTFLGVS LIAFSFIRML PGDPVMLLSG ERVMAPERHA QIMHDLGFDR 
PMYVQYFDYL GKILHGDLGT SIVTKRPVLG EFLTLFPATL ELSLCAIILA VCLGVPAGIF
AAVKRGTWFD QSVMGIALIG YSMPIFWWGL LLIIFFSGYL GWTPVSGRIS LMYFFKPVTG
FMLVDSLLSG QKGAFSSAVS YLILPTIVLA TIPLAVIARQ TRSAMLEVLG EDYVRTARSK
GLKPLRVVGV HALRNAMIPV ITTIGLQIGV LLAGAILTET IFSWPGIGKW MVDSVFKRDY
AVVQGGLLLI AGVIMLVNLI VDVLYGFINP RIRH