Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_0423 |
Symbol | |
ID | 8011625 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | + |
Start bp | 439990 |
End bp | 440994 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644823018 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_002974272 |
Protein GI | 241203176 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0103751 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0395583 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTGCGTT TTTTTATCGG CCGCCTTGCG GTGCTGATCC CGACATTCCT CGGCGTTTCC CTCATTGCCT TCTCGTTCAT CCGCATGCTT CCCGGCGATC CCGTCATGCT CCTGTCGGGG GAACGCGTCA TGGCGCCGGA GCGGCACGCC CAGATCATGC ATGATCTCGG TTTCGACCGG CCGATGTATG TGCAGTATTT CGATTATCTC GGAAAAATCC TGCATGGCGA TCTCGGCACC TCGATCGTCA CCAAGCGGCC CGTTCTCGGC GAATTCCTGA CACTGTTTCC GGCAACGCTC GAGCTTTCGC TCTGTGCCAT CATCCTCGCC GTCTGTCTTG GCGTGCCCGC CGGTATCTTT GCCGCCGTCA AGCGAGGCAC GTGGTTCGAC CAAAGCGTGA TGGGTATTGC CCTTATCGGA TATTCCATGC CGATCTTCTG GTGGGGGCTG CTGCTGATCA TCTTCTTCTC CGGCTATCTC GGCTGGACGC CCGTTTCCGG CCGCATCTCG CTGATGTATT TCTTCAAGCC GGTCACCGGA TTCATGCTGG TCGACAGCCT GCTGTCGGGC CAGAAGGGCG CGTTTTCCTC GGCCGTCAGC TACCTCATTC TGCCGACGAT CGTGCTGGCG ACCATCCCGC TTGCCGTCAT CGCCCGCCAG ACGCGTTCGG CGATGCTCGA GGTTCTGGGT GAGGATTATG TCCGCACGGC GCGCTCGAAG GGCCTGAAGC CGCTGCGCGT CGTCGGCGTG CATGCGCTGC GCAATGCAAT GATCCCTGTC ATCACCACCA TCGGTCTGCA GATCGGCGTT CTTCTTGCCG GCGCCATCCT CACCGAGACG ATCTTCTCCT GGCCGGGCAT CGGCAAATGG ATGGTCGATT CGGTGTTCAA GCGCGATTAC GCCGTGGTCC AGGGCGGTCT TCTGCTGATC GCCGGCGTCA TCATGCTGGT CAACCTGATT GTTGATGTTC TCTACGGCTT CATCAATCCG CGCATTCGTC ATTAG
|
Protein sequence | MLRFFIGRLA VLIPTFLGVS LIAFSFIRML PGDPVMLLSG ERVMAPERHA QIMHDLGFDR PMYVQYFDYL GKILHGDLGT SIVTKRPVLG EFLTLFPATL ELSLCAIILA VCLGVPAGIF AAVKRGTWFD QSVMGIALIG YSMPIFWWGL LLIIFFSGYL GWTPVSGRIS LMYFFKPVTG FMLVDSLLSG QKGAFSSAVS YLILPTIVLA TIPLAVIARQ TRSAMLEVLG EDYVRTARSK GLKPLRVVGV HALRNAMIPV ITTIGLQIGV LLAGAILTET IFSWPGIGKW MVDSVFKRDY AVVQGGLLLI AGVIMLVNLI VDVLYGFINP RIRH
|
| |