| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_0406 |
|---|
| Symbol | |
|---|
| ID | 8011609 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | + |
|---|
| Start bp | 418751 |
|---|
| End bp | 420160 |
|---|
| Gene Length | 1410 bp |
|---|
| Protein Length | 469 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644823001 |
|---|
| Product | transcriptional regulator, XRE family |
|---|
| Protein accession | YP_002974256 |
|---|
| Protein GI | 241203160 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3800] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0000157456 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGAAC GGAAGATATT CGCAGGCCCG AAAGTCAGGC GCATCCGCAA TGCGCTGGCG
CTGACGCAGA CCGCCATGGC CGAGGCGTTG GAAATATCGC CGTCCTATCT GAACCTGATC
GAGCGCAACC AGCGGCCGCT GACGGTGCAG CTCCTTCTCA AGCTTGCAAG CGTCTACAGG
GTCGATCTGG AAGAGTTGCG CGGACAGACC GGCGGCAGTC TCGGCCAGCT CAAGGAGGTC
TTTGCCGATC CGCTGCTATC GGGCGAGCTG CCGGGTGATC AGGAATTGGT GGAGGTGGCC
GAGGCCGCAC CCAATGCCGC CAGCGGCATG ATCAAGCTCT ACCGCGCCTA TCGCGAGCAG
GCGGCGAGGC TGTCCGATCT GACGGTGCTG ATGGCCGCCG AAGGGCATGC ACCGGTCGCC
GCCGGCCGGT TGCCGCTGGA CGAGGTGCGC GAGACGCTGG AGCGCAGGTC CGGCTATTTC
GCGCGGATCG AGACGGCGGC GGAAGCTTTT GCCGCAACGC TCCCCGGCGG CCTCGATCTT
GCCGCCGGGC TGAAGGATTG GCTGCGCTCC GAGCGCGGCA TCGCGGTGCG TGTCTTGCCC
GTCCACGTCA TGCCGGATCT GCGCCGTCGT TTCGATCGCC ATTCGATGCG GCTTTTCATC
TCGGAGCGCC TTTCGCAGGC CGACCGTGCG CACGAGATTG CGGTCGAGGC CGCGACTCTG
GCCCTGCTGC CGGCAATCGA TGCCGAGCTC GACGATCTCT CGCTCTCCTC CGCCGAGGCG
CGCCGCATCG CCCGCTTCGA GCTTGCCCGC ATCGCCGCGC TGGCGCTTGC AATGCCCTAC
GAGGCCTTTC TCTCGGCGGC GAAGGCGACG CGCTACGATA TCGATATTCT GCGTGCGCGC
TTCGGCGTCT CCTTCGGCCA GGCTGCTGCA CGTCTTGCGA TGCTGCAGCG CCCCGGGGCG
GCCGCCATTC CCTTCTTCCT GATCGAGATC GATGCCGCCG GCCACCGGCT GCGCAGGGCG
GGCGCCCAGG GCTTTCCGCA GGCCCGTTTC GGCGGCGGCT GTCCGAAGCT CAATCTCCAT
GCCGCTTTCC TGCAGCCGGG CCAGATCCTC GCCGAAACGG TCGTCATGCC TGATGGCGCA
TCCTTCCTGA CGGTCGCCCG CACCCTGGAG GGACCGAGCG TCGAATTCGG CGAAAGGGTC
AGGCGCACGG CGATCCTGAT CGGCTGCGAC GCTGCCCTTG GCGAGGGCGT GGTCTATGGG
CAGGCGATGG CGCTCGAGCC GGTCGCGGTC GGTCCGGCCT GTCGCCTTTG CGAGCGGCGC
GGCTGCCTTT CCCGGGCCGA GCCGCCGGTG ACGAGACCGC TTGGGCTCGA CGAGATGGTG
GCAGGCCTCA GCGCCTTCGA TTTCCAGTGA
|
|---|
| Protein sequence | MAERKIFAGP KVRRIRNALA LTQTAMAEAL EISPSYLNLI ERNQRPLTVQ LLLKLASVYR
VDLEELRGQT GGSLGQLKEV FADPLLSGEL PGDQELVEVA EAAPNAASGM IKLYRAYREQ
AARLSDLTVL MAAEGHAPVA AGRLPLDEVR ETLERRSGYF ARIETAAEAF AATLPGGLDL
AAGLKDWLRS ERGIAVRVLP VHVMPDLRRR FDRHSMRLFI SERLSQADRA HEIAVEAATL
ALLPAIDAEL DDLSLSSAEA RRIARFELAR IAALALAMPY EAFLSAAKAT RYDIDILRAR
FGVSFGQAAA RLAMLQRPGA AAIPFFLIEI DAAGHRLRRA GAQGFPQARF GGGCPKLNLH
AAFLQPGQIL AETVVMPDGA SFLTVARTLE GPSVEFGERV RRTAILIGCD AALGEGVVYG
QAMALEPVAV GPACRLCERR GCLSRAEPPV TRPLGLDEMV AGLSAFDFQ
|
|---|
| |