Gene Rleg_0406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_0406 
Symbol 
ID8011609 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp418751 
End bp420160 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content68% 
IMG OID644823001 
Producttranscriptional regulator, XRE family 
Protein accessionYP_002974256 
Protein GI241203160 
COG category[R] General function prediction only 
COG ID[COG3800] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000157456 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCGGAAC GGAAGATATT CGCAGGCCCG AAAGTCAGGC GCATCCGCAA TGCGCTGGCG 
CTGACGCAGA CCGCCATGGC CGAGGCGTTG GAAATATCGC CGTCCTATCT GAACCTGATC
GAGCGCAACC AGCGGCCGCT GACGGTGCAG CTCCTTCTCA AGCTTGCAAG CGTCTACAGG
GTCGATCTGG AAGAGTTGCG CGGACAGACC GGCGGCAGTC TCGGCCAGCT CAAGGAGGTC
TTTGCCGATC CGCTGCTATC GGGCGAGCTG CCGGGTGATC AGGAATTGGT GGAGGTGGCC
GAGGCCGCAC CCAATGCCGC CAGCGGCATG ATCAAGCTCT ACCGCGCCTA TCGCGAGCAG
GCGGCGAGGC TGTCCGATCT GACGGTGCTG ATGGCCGCCG AAGGGCATGC ACCGGTCGCC
GCCGGCCGGT TGCCGCTGGA CGAGGTGCGC GAGACGCTGG AGCGCAGGTC CGGCTATTTC
GCGCGGATCG AGACGGCGGC GGAAGCTTTT GCCGCAACGC TCCCCGGCGG CCTCGATCTT
GCCGCCGGGC TGAAGGATTG GCTGCGCTCC GAGCGCGGCA TCGCGGTGCG TGTCTTGCCC
GTCCACGTCA TGCCGGATCT GCGCCGTCGT TTCGATCGCC ATTCGATGCG GCTTTTCATC
TCGGAGCGCC TTTCGCAGGC CGACCGTGCG CACGAGATTG CGGTCGAGGC CGCGACTCTG
GCCCTGCTGC CGGCAATCGA TGCCGAGCTC GACGATCTCT CGCTCTCCTC CGCCGAGGCG
CGCCGCATCG CCCGCTTCGA GCTTGCCCGC ATCGCCGCGC TGGCGCTTGC AATGCCCTAC
GAGGCCTTTC TCTCGGCGGC GAAGGCGACG CGCTACGATA TCGATATTCT GCGTGCGCGC
TTCGGCGTCT CCTTCGGCCA GGCTGCTGCA CGTCTTGCGA TGCTGCAGCG CCCCGGGGCG
GCCGCCATTC CCTTCTTCCT GATCGAGATC GATGCCGCCG GCCACCGGCT GCGCAGGGCG
GGCGCCCAGG GCTTTCCGCA GGCCCGTTTC GGCGGCGGCT GTCCGAAGCT CAATCTCCAT
GCCGCTTTCC TGCAGCCGGG CCAGATCCTC GCCGAAACGG TCGTCATGCC TGATGGCGCA
TCCTTCCTGA CGGTCGCCCG CACCCTGGAG GGACCGAGCG TCGAATTCGG CGAAAGGGTC
AGGCGCACGG CGATCCTGAT CGGCTGCGAC GCTGCCCTTG GCGAGGGCGT GGTCTATGGG
CAGGCGATGG CGCTCGAGCC GGTCGCGGTC GGTCCGGCCT GTCGCCTTTG CGAGCGGCGC
GGCTGCCTTT CCCGGGCCGA GCCGCCGGTG ACGAGACCGC TTGGGCTCGA CGAGATGGTG
GCAGGCCTCA GCGCCTTCGA TTTCCAGTGA
 
Protein sequence
MAERKIFAGP KVRRIRNALA LTQTAMAEAL EISPSYLNLI ERNQRPLTVQ LLLKLASVYR 
VDLEELRGQT GGSLGQLKEV FADPLLSGEL PGDQELVEVA EAAPNAASGM IKLYRAYREQ
AARLSDLTVL MAAEGHAPVA AGRLPLDEVR ETLERRSGYF ARIETAAEAF AATLPGGLDL
AAGLKDWLRS ERGIAVRVLP VHVMPDLRRR FDRHSMRLFI SERLSQADRA HEIAVEAATL
ALLPAIDAEL DDLSLSSAEA RRIARFELAR IAALALAMPY EAFLSAAKAT RYDIDILRAR
FGVSFGQAAA RLAMLQRPGA AAIPFFLIEI DAAGHRLRRA GAQGFPQARF GGGCPKLNLH
AAFLQPGQIL AETVVMPDGA SFLTVARTLE GPSVEFGERV RRTAILIGCD AALGEGVVYG
QAMALEPVAV GPACRLCERR GCLSRAEPPV TRPLGLDEMV AGLSAFDFQ