Gene Rleg_0405 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_0405 
Symbol 
ID8011608 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp417271 
End bp418560 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content63% 
IMG OID644823000 
Productisocitrate lyase 
Protein accessionYP_002974255 
Protein GI241203159 
COG category[C] Energy production and conversion 
COG ID[COG2224] Isocitrate lyase 
TIGRFAM ID[TIGR01346] isocitrate lyase 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.000156057 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACGGATT TTTACAAGCT TGTCCCAAAC GCTTTAGCCG ATCGCTTCGA CGGCATCGAG 
AGACCGTACT CGGCCGAAGA CGTGCAGCGG CTCAGAGGCT CGGTGGCGCT CAGCCATACG
CTGGCCGCAA TGGGGGCGGA TCGGTTGTGG CAGCTTCTGC ATCAGGAGGA TTTCGTCAAT
GCGCTCGGCG CACTTTCCGG CAACCAGGCT ATGCAGATGG TGCGCGCCGG GCTGAAGGCG
ATCTATCTCT CCGGCTGGCA GGTGGCGGCC GACGCCAATA CGGCATCTGC GATGTATCCC
GACCAGTCCC TCTATCCGGC CAATGCCGGT CCGGAACTGG CCAAACGCAT CAACCGCACG
CTGCAGCGCG CCGATCAGAT CGAGACCGCG GAAGCCCAGG GGCTTTCCGT CGAGACCTGG
TTCGCGCCGA TCGTTGCCGA TGCGGAAGCA GGCTTCGGCG GACCGCTCAA CGCCTTCGAA
ATCATGAAGG CCTATATCGA GGCGGGTGCC GCGGGCGTTC ACTTCGAGGA CCAGCTCGCT
TCGGAGAAGA AATGCGGCCA TCTCGGCGGC AAAGTGCTGA TCCCGACGGC CGCCCATATC
CGCAATCTCG ACGCCGCGCG GCTTGCCGCC GACGTCATGG GCGTTGCGAC GCTGGTCATC
GCCCGCACCG ACGCGGAAGC GGCAAAGCTC TTGACGTCGG ACATCGACGA ACGCGACCAA
CCCTTCGTCG ACTATGATGC CGGCCGTACG GTCGAAGGTT TCTATCAGGT GCGAAACGGC
ATCGAGCCCT GTATCGCGCG CGCCGTCGCC TATGCGCCGC ATTGCGATCT CATCTGGTGC
GAGACCTCGA AGCCGGACCT CGATCAGGCG CGCCGCTTTG CCGAAGGCGT GCACAAGGTC
CATCCCGGCA AGCTGCTCGC CTATAATTGC TCACCTTCCT TCAACTGGAA GAAGAATCTC
GACGAGGCGA CGATCGCACG GTTCCAGCGC GAACTCGGAG CGATGGGCTA CAAATTCCAG
TTCATCACGC TCGCCGGCTT CCACCAGCTG AACTACGGCA TGTACGAGCT GGCGCGCGGC
TACCGGCAGC GGCAGATGTC GGCCTATTCC GAGCTGCAGC AGGCGGAATT CGCCGCCGAG
GTCAATGGCT ATACCGCCAC CAAACACCAG CGCGAGGTCG GCACCGGCTA TTTCGACGCC
GTGTCGCTCG CCATCACCGG CGGCCGGTCG TCGACCACGG CGATGCACGG TTCGACCGAG
CATGCGCAGT TCAAACCGGC TGCGGAATAA
 
Protein sequence
MTDFYKLVPN ALADRFDGIE RPYSAEDVQR LRGSVALSHT LAAMGADRLW QLLHQEDFVN 
ALGALSGNQA MQMVRAGLKA IYLSGWQVAA DANTASAMYP DQSLYPANAG PELAKRINRT
LQRADQIETA EAQGLSVETW FAPIVADAEA GFGGPLNAFE IMKAYIEAGA AGVHFEDQLA
SEKKCGHLGG KVLIPTAAHI RNLDAARLAA DVMGVATLVI ARTDAEAAKL LTSDIDERDQ
PFVDYDAGRT VEGFYQVRNG IEPCIARAVA YAPHCDLIWC ETSKPDLDQA RRFAEGVHKV
HPGKLLAYNC SPSFNWKKNL DEATIARFQR ELGAMGYKFQ FITLAGFHQL NYGMYELARG
YRQRQMSAYS ELQQAEFAAE VNGYTATKHQ REVGTGYFDA VSLAITGGRS STTAMHGSTE
HAQFKPAAE