Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_0405 |
Symbol | |
ID | 8011608 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | - |
Start bp | 417271 |
End bp | 418560 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644823000 |
Product | isocitrate lyase |
Protein accession | YP_002974255 |
Protein GI | 241203159 |
COG category | [C] Energy production and conversion |
COG ID | [COG2224] Isocitrate lyase |
TIGRFAM ID | [TIGR01346] isocitrate lyase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.000156057 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGACGGATT TTTACAAGCT TGTCCCAAAC GCTTTAGCCG ATCGCTTCGA CGGCATCGAG AGACCGTACT CGGCCGAAGA CGTGCAGCGG CTCAGAGGCT CGGTGGCGCT CAGCCATACG CTGGCCGCAA TGGGGGCGGA TCGGTTGTGG CAGCTTCTGC ATCAGGAGGA TTTCGTCAAT GCGCTCGGCG CACTTTCCGG CAACCAGGCT ATGCAGATGG TGCGCGCCGG GCTGAAGGCG ATCTATCTCT CCGGCTGGCA GGTGGCGGCC GACGCCAATA CGGCATCTGC GATGTATCCC GACCAGTCCC TCTATCCGGC CAATGCCGGT CCGGAACTGG CCAAACGCAT CAACCGCACG CTGCAGCGCG CCGATCAGAT CGAGACCGCG GAAGCCCAGG GGCTTTCCGT CGAGACCTGG TTCGCGCCGA TCGTTGCCGA TGCGGAAGCA GGCTTCGGCG GACCGCTCAA CGCCTTCGAA ATCATGAAGG CCTATATCGA GGCGGGTGCC GCGGGCGTTC ACTTCGAGGA CCAGCTCGCT TCGGAGAAGA AATGCGGCCA TCTCGGCGGC AAAGTGCTGA TCCCGACGGC CGCCCATATC CGCAATCTCG ACGCCGCGCG GCTTGCCGCC GACGTCATGG GCGTTGCGAC GCTGGTCATC GCCCGCACCG ACGCGGAAGC GGCAAAGCTC TTGACGTCGG ACATCGACGA ACGCGACCAA CCCTTCGTCG ACTATGATGC CGGCCGTACG GTCGAAGGTT TCTATCAGGT GCGAAACGGC ATCGAGCCCT GTATCGCGCG CGCCGTCGCC TATGCGCCGC ATTGCGATCT CATCTGGTGC GAGACCTCGA AGCCGGACCT CGATCAGGCG CGCCGCTTTG CCGAAGGCGT GCACAAGGTC CATCCCGGCA AGCTGCTCGC CTATAATTGC TCACCTTCCT TCAACTGGAA GAAGAATCTC GACGAGGCGA CGATCGCACG GTTCCAGCGC GAACTCGGAG CGATGGGCTA CAAATTCCAG TTCATCACGC TCGCCGGCTT CCACCAGCTG AACTACGGCA TGTACGAGCT GGCGCGCGGC TACCGGCAGC GGCAGATGTC GGCCTATTCC GAGCTGCAGC AGGCGGAATT CGCCGCCGAG GTCAATGGCT ATACCGCCAC CAAACACCAG CGCGAGGTCG GCACCGGCTA TTTCGACGCC GTGTCGCTCG CCATCACCGG CGGCCGGTCG TCGACCACGG CGATGCACGG TTCGACCGAG CATGCGCAGT TCAAACCGGC TGCGGAATAA
|
Protein sequence | MTDFYKLVPN ALADRFDGIE RPYSAEDVQR LRGSVALSHT LAAMGADRLW QLLHQEDFVN ALGALSGNQA MQMVRAGLKA IYLSGWQVAA DANTASAMYP DQSLYPANAG PELAKRINRT LQRADQIETA EAQGLSVETW FAPIVADAEA GFGGPLNAFE IMKAYIEAGA AGVHFEDQLA SEKKCGHLGG KVLIPTAAHI RNLDAARLAA DVMGVATLVI ARTDAEAAKL LTSDIDERDQ PFVDYDAGRT VEGFYQVRNG IEPCIARAVA YAPHCDLIWC ETSKPDLDQA RRFAEGVHKV HPGKLLAYNC SPSFNWKKNL DEATIARFQR ELGAMGYKFQ FITLAGFHQL NYGMYELARG YRQRQMSAYS ELQQAEFAAE VNGYTATKHQ REVGTGYFDA VSLAITGGRS STTAMHGSTE HAQFKPAAE
|
| |