| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_0397 |
|---|
| Symbol | |
|---|
| ID | 8011601 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | - |
|---|
| Start bp | 407648 |
|---|
| End bp | 409084 |
|---|
| Gene Length | 1437 bp |
|---|
| Protein Length | 478 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644822992 |
|---|
| Product | Glutamate--putrescine ligase |
|---|
| Protein accession | YP_002974247 |
|---|
| Protein GI | 241203151 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0174] Glutamine synthetase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.913319 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.0167683 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCCAA AAAAGACGAC GCTGAAGCCT GCCAGAAACG TACCCGCCTC GAAGAAAACT
CCCCCGGAAC CCGGATCCCT GCGTGGCGTT GCGAACTGGA AGGAAGCAGC GCGGTGGCTG
AGGGCGAGAG GCATCGAAGA CATCGAATGC ATCACGCCGG ACCTTGCCGG CGTTGCGCGC
GGCAAGATGA TGCCGAGCTC GAAATTCACC TCCAACACCT CGCTGGCGCT GCCTTCGGCC
ATCTACCGGC ACACGATTTC GGGCGAATAT CCCGACGAGA CGGAGAGCTT CCGCTATGAG
CCGCGCGACA GCGACCTGAA GCTGATGCCC GACCTTTCGA CGCTGTCCGT CGTGCCCTGG
GAGACCGACC CGACGGCGCA GGTGATCTGC GATATCGTCG ATTCGGACGG CGGCGAAGTG
CCCTATACGC CGCGCAACGT GCTGAAGCGG ATCATGAGCC TCTATCATGA GCGCGGCTGG
AAACCGATCG TGGCGCCCGA GATCGAATTC TATCTCGTCG CCAAAAACGA CGATCCCGAC
TATCCGCTCC ACCCGCCCAA AGGCCGGTCC GGCCGCTCGA TCCTCGGCGG CCAGGGCTAT
TCGATCGCCG GCATCAACGA GTTCGACGAA CTGATCGACG ACGTCTATCA TTTCTCGGAG
AAGCAGGGGC TGGAGATCGA TACGCTGATC CATGAAGAGG GACCGGCGCA GATGGAGATC
AACCTGCGCC ACGGCAATCC GATCGAACTT GCCGACCAGG TATTCCTGTT CAAGCGGACG
ATCCGCGAGG CGGCACTGAA ACACGACATC TATGCGACCT TCATGGCCAA GCCGATGCAG
GGCCAGCCGG GTTCGGCGAT GCATATCCAC CAGTCGGTGG TCGATATCGA GACCGGCAAG
AACATCTTCT CCAATGCCGA TGGCTCGGCT TCGAAGGAAT TCTTCCATTT CATCGGCGGC
ATGCAGAAAT TCGTGCCGAG CGCGATGGCG ATGCTGGCGC CTTACGTGAA TTCCTACCGA
CGCCTGCAGC CCGATATGTC CTGCCCGGTC AACAATGCCT GGGGTTACGA CAACCGGACG
ACCGCCTTCC GTGTCCCGGT CTCCGATCCG CAGGCGCGGC GCGTGGAAAA CCGGCTGCCG
AGCTCGGACG CCAACCCCTA TCTCGCGCTC GCCGCCTCGC TCGCCTCCGG CCTGCTCGGC
ATCATGAAGC AGATCGAGCC GACGGCGCCG ACCGAGGATT CGGCCAATGA GGGATCGATC
GACCTGCCGC GCGGCCTGCT GGAAGCCGTG GCGCTGCTCG AGGACGAACC CGCTTTCGAG
GAGATGTTCG GCAAGCAGTT CATCGGCCTT TATGCCGGCG TCAAGCGCGG CGAGTTCGAG
ACCTTCATGC AGGTGATCAG CCCCTGGGAG CGGGAATTCC TTCTGCTCAA CGTGTGA
|
|---|
| Protein sequence | MSPKKTTLKP ARNVPASKKT PPEPGSLRGV ANWKEAARWL RARGIEDIEC ITPDLAGVAR
GKMMPSSKFT SNTSLALPSA IYRHTISGEY PDETESFRYE PRDSDLKLMP DLSTLSVVPW
ETDPTAQVIC DIVDSDGGEV PYTPRNVLKR IMSLYHERGW KPIVAPEIEF YLVAKNDDPD
YPLHPPKGRS GRSILGGQGY SIAGINEFDE LIDDVYHFSE KQGLEIDTLI HEEGPAQMEI
NLRHGNPIEL ADQVFLFKRT IREAALKHDI YATFMAKPMQ GQPGSAMHIH QSVVDIETGK
NIFSNADGSA SKEFFHFIGG MQKFVPSAMA MLAPYVNSYR RLQPDMSCPV NNAWGYDNRT
TAFRVPVSDP QARRVENRLP SSDANPYLAL AASLASGLLG IMKQIEPTAP TEDSANEGSI
DLPRGLLEAV ALLEDEPAFE EMFGKQFIGL YAGVKRGEFE TFMQVISPWE REFLLLNV
|
|---|
| |