Gene Rleg_0330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_0330 
Symbol 
ID8011543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp340560 
End bp342836 
Gene Length2277 bp 
Protein Length758 aa 
Translation table11 
GC content63% 
IMG OID644822925 
ProductCheA signal transduction histidine kinase 
Protein accessionYP_002974180 
Protein GI241203084 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0643] Chemotaxis protein histidine kinase and related kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.362553 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.384107 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATATGA ACGAAATCAA AGAGATCTTT TTCCAGGAGT GCGAGGAACA GCTCGCAGAA 
TTGGAATCCG GTCTTCTGAA AATGAATGAT GGCGATCGCG ATCCGGAAAC CGTCAATGCG
GTGTTCCGTG CCGTGCATTC GATCAAGGGC GGCGCCGGCG CCTTCGGCCT TGACGATCTG
GTAGCCTTCG CCCATGTTTT CGAGACCACT CTCGATTGCG TTCGATCCAA CAAGCTTGAG
CCGAACCAGG ACGTCCTGAA GGTGATGCTG AAGTCGGCCG ACGTGCTCGC TGACCTGACG
AACGTTGCGC GCGACGGCGG CAGCGTCGAT GAAAGCCGCA GCCGCGGCCT CGTCAGGGAG
CTCGAGGCGC TGGCCAACGG TGAAATGCCG TCTCCCTCGG CGTCAGTCGA GGCGCCTGCG
CCGAAGGCAG CCGCAAAGGC CGCTCCGGCG CCGACCCCCA AGCCGACGGA CGACAGCGGC
TTCCAGCCGG TCCCCTTTTC CTTCGACGAT TTTGGCGGCG AGGGCGATGC CGGCGGCATG
CCGGCCTATG AAGTCATCTT CAAGCCGCGC TACGAACTCT ATTCCAAGGG CAATGACGCC
ACCCTGCTGC TGCGCGATCT CTCGCGCCTC GGCGAAATGA CGATCTATTG CAATACGGAT
GACCTCCCGG GCCTCGAGGA GCTCGATCCG GAAGGCGCTT ATTTCTTCTG GAATGTCACG
ATCAAGACGG ACAAGGGCGA GGACGCCATC CGCACCGTCT TCGAATTCGC CGAGTGGGAT
TGCGAACTGA CGGTAAAGCC GGTCGAAGAA GCAAGGGCCG AGGCGACCAG CAACGACGAA
CTGCCGATGG TGCCGGTTCC TTTCGACCTG TCGATCCTGG ACGAAGCCGG CGCAATCGAA
GAGGTTTCCG CCTCAGACGC GCGGGCCGAG GAGACGGCCG CAGCCGTTGC CGCAGCCGAG
ACTGCCTCCA ACGTCACGCA GATTGTCGCC GCCCGCGTAG AGAAGAAGGA ATCGGCCGCC
GCCGCAGCGG CCGCAGCAAG TGCTGCCGCT CAGAACAATG CCGCCGGTGC CGGCCAGACG
ATCCGCGTCG ATCTCGACCG TGTCGACCGC CTCATCAACC TCGTCGGCGA ATTGGTCATC
AACCAGGCGA TGCTGTCGCA GAGCGTCATC GAGAACGACA CGACCGGCAC CTCCTCGATC
AATATGGGCC TCGAGGAGCT GCAGCAGCTC ACCCGCGAGA TCCAGGACTC GGTCATGGCG
ATCCGCGCGC AGCCGGTGAA GCCGGTCTTC CAGCGCATGT CGCGTATCGT CCGCGAAATC
GCCGACATGA CCGGCAAGTC GATCCGCCTG ATCACCGAAG GTGAAAACAC CGAAGTCGAC
AAGACGGTCA TCGACAAGCT GGCCGAACCG CTGACCCACA TGATCCGCAA CGCCGTCGAC
CACGGCATCG AAACGCCCGA AAAGCGTGCA GCCGCCGGCA AGAACACCGA AGGCACTGTC
CGCCTGACCG CCAAGCATCG TTCGGGACGC ATCCTGATCG AGCTTGCCGA CGACGGTGCC
GGTATCAACC GCGAGAAGGT CCGCCAGAAG GCGATCGACA ACGACCTCAT CCCGGCCGAT
TCCAACCTGT CGGACGAGGA AATCGACAAC CTGATCTTCC TGCCGGGCTT CTCGACGGCC
GACAAGATCT CCGACATCTC CGGCCGCGGC GTTGGCATGG ACGTCGTCAA ACGTTCGATC
CAGGCGCTCG GCGGCCGCAT CAACATCACC TCGAAGCCGG GTCACGGCTC GGTCTTCACC
ATGAGCCTGC CGCTGACGCT CGCCGTCCTC GACGGCATGG TAGTCACTGT CGCCGGCCAG
ACGCTGGTCG TGCCGCTGAC GGCGATCGTC GAAACCCTGC AGCCGGAAGC GGCCGCGATC
CACTCCTTCG GTGCCAACCA CCGGCTGATC TCGATCCGCA ACAGCTTCTG CCCGCTGGTC
GATGTCGGCC GCATCCTGAA CTTCCGCGCC ACCCAGGCCA ATCCGGTCGA GGGCGTGGCG
CTTCTGGTGG AATCCGAAGG CGGCGGCCAG CGCGCCCTGA TGGTCGATGC CATCCAGGGT
CAGCGCCAGG TGGTCATCAA GAGCCTGGAA GCGAACTACA CCCATGTGCC GGGCATTGCC
GCCGCCACCA TCCTCGGTGA CGGGCGCGTC GCTCTCATCC TCGATGTCGA CGCAGTCGTC
GGCGCCTCGC GCGGCCAGTC GCTCAAAGCG GAAATGTCGT TAGCAGCGGT GGGATAA
 
Protein sequence
MDMNEIKEIF FQECEEQLAE LESGLLKMND GDRDPETVNA VFRAVHSIKG GAGAFGLDDL 
VAFAHVFETT LDCVRSNKLE PNQDVLKVML KSADVLADLT NVARDGGSVD ESRSRGLVRE
LEALANGEMP SPSASVEAPA PKAAAKAAPA PTPKPTDDSG FQPVPFSFDD FGGEGDAGGM
PAYEVIFKPR YELYSKGNDA TLLLRDLSRL GEMTIYCNTD DLPGLEELDP EGAYFFWNVT
IKTDKGEDAI RTVFEFAEWD CELTVKPVEE ARAEATSNDE LPMVPVPFDL SILDEAGAIE
EVSASDARAE ETAAAVAAAE TASNVTQIVA ARVEKKESAA AAAAAASAAA QNNAAGAGQT
IRVDLDRVDR LINLVGELVI NQAMLSQSVI ENDTTGTSSI NMGLEELQQL TREIQDSVMA
IRAQPVKPVF QRMSRIVREI ADMTGKSIRL ITEGENTEVD KTVIDKLAEP LTHMIRNAVD
HGIETPEKRA AAGKNTEGTV RLTAKHRSGR ILIELADDGA GINREKVRQK AIDNDLIPAD
SNLSDEEIDN LIFLPGFSTA DKISDISGRG VGMDVVKRSI QALGGRINIT SKPGHGSVFT
MSLPLTLAVL DGMVVTVAGQ TLVVPLTAIV ETLQPEAAAI HSFGANHRLI SIRNSFCPLV
DVGRILNFRA TQANPVEGVA LLVESEGGGQ RALMVDAIQG QRQVVIKSLE ANYTHVPGIA
AATILGDGRV ALILDVDAVV GASRGQSLKA EMSLAAVG