| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_0276 |
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| Symbol | |
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| ID | 8011496 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012850 |
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| Strand | - |
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| Start bp | 285931 |
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| End bp | 287646 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644822871 |
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| Product | type I secretion system ATPase |
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| Protein accession | YP_002974126 |
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| Protein GI | 241203030 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4618] ABC-type protease/lipase transport system, ATPase and permease components |
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| TIGRFAM ID | [TIGR01842] type I secretion system ABC transporter, PrtD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACAA TTTCCATAAA GCCACCGCGC CCGCCGACAC AGCTTGTTGT TGCGCTCCGG
GCTTGTGCCG GAGCCTTCGG GCTGGTCTTC CTCTATAGCT GCGGCTACAA TCTGTTTCTT
CTCGCGCCTT CGATCTATCT CCTGCAGATC TATGACAGGG TCCTGTCGAG CCGAAGCGCT
GACACGCTGC TGATGCTGAC GATGATCATC GCCATCGGCG TGATGGTCGG ATCCACGCTG
GATATCGTGC GCAGAGCAGC TCTTTCGCGC ATCGGCAGTT GGCTGGACCA CCGGCTGCGG
CCCATGGTGC TGACGGCATC GTTCGAATAT GCCGCTCGCG CCGATACGGG AGCCGCCACG
GAATGCTACA GGGACCTGGC CGCACTACGC CAGTTCCTCG ATTCACCGGC TAGCTCGCTC
TTTTTTGATG TTCCCTGGGC ACCGGTATTC CTGTTCCTGC TCTTTCTTGT TCATCCGTTG
CTTGGGACCA TCGGTCTTCT GAGCGCGCTT GCACTTCTGC TGTTTGCGTT CCTGACGGAA
CTGGCGACGA GAGAGCCGCT TGCCTACGCC AATCTTGCCC TTTCGAGGAG CTATATCCGG
TTTGCGACCG CCCTCAAAAA CATCGAGGTG ATCCGGGCAA TGGGCATGCA GGATGGCGCA
GCGCTGATCG TCTATCGCGA TGCGGAAATG GCAAGAAGGG CGCAGGACAT CGCGATGCAT
CGGACGGAGA TCATTCTTGG TTTCTCCAAA TCGATCCGCA CCCTCGCGCA GATCCTGATG
ATGGGATCCG CCACCTGGCT GGTGCTCGCA AACAATGGCA GTGCCGGGAT CATCTTCGTT
GCGAGCCTGC TGCTCGGACG CGGGCTTGCA CCAATCGAGG GCGCAATAGG TGCATGGCGC
TCCTTTACGT TTGCGCGCAA TGCCTTCAAT CGCTTGAACA GAATGCTGAT ATCAGTTGCA
TCTGAACACG ATGCTCGAAT GGTGCCGTTA CCGGAACCCA ATGGCCTCGT TCTCGATAAT
GTCAGCTATA TCAAGCCATT CGCCGATCGG CCGATATTGA CAGGCATCAC CTTGCGCCTC
GCGCCCGGCG ATTGCATAGC GCTCATCGGT CCTTCGGGAT CGGGAAAATC GACACTCGGT
CGCGTCATAG CAGGCGTTGT GCAAGCAACG AGCGGATGTG CTCTTCTCGG CGGGGTCGAT
ATCTCAGCTC TGCGCCTTTG CGGGGGGACC CGCCACGTCG GATACCTGCC GCAGGACATC
GAACTTTTCG GCGGGGCGAT CAAGGATGTG ATCGGCCGGC TGGACGGAGG AGATCCCGGC
AAGGCGATCG ACGCCGCAAA GCTGGTTGGC TTGCACGACG CGATCATGCG GCTGCCCCAG
GGCTACGAGA CCGATATCGG TGAAGGTGGA AACCTGCTCC TTCGAGCGCA ACGCCAACAG
TTGGGACTGG CACGGGCGGC CTATGGAAAT CCGTCCCTGA TCGTTCTCGA CGATCCGAAT
TCGAGCCTGG ATTATGACGG CGAACGCATG CTGTTCACGG CAATCGAGCG TATGAAATCC
AGGGGGATGA CCGTCGTTAT CATGACTCAC CGGATGGGGA TCCTGCCGGT CACCAACAAG
ATTGCCATCA TGCGTAACGG GACGGTGGCA GCCTTCGGCG ACAGCGAGCG GATTTATGAA
ACTTATCTTC AGCCACCGTC TCGAACAGGA ACATAG
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| Protein sequence | MTTISIKPPR PPTQLVVALR ACAGAFGLVF LYSCGYNLFL LAPSIYLLQI YDRVLSSRSA
DTLLMLTMII AIGVMVGSTL DIVRRAALSR IGSWLDHRLR PMVLTASFEY AARADTGAAT
ECYRDLAALR QFLDSPASSL FFDVPWAPVF LFLLFLVHPL LGTIGLLSAL ALLLFAFLTE
LATREPLAYA NLALSRSYIR FATALKNIEV IRAMGMQDGA ALIVYRDAEM ARRAQDIAMH
RTEIILGFSK SIRTLAQILM MGSATWLVLA NNGSAGIIFV ASLLLGRGLA PIEGAIGAWR
SFTFARNAFN RLNRMLISVA SEHDARMVPL PEPNGLVLDN VSYIKPFADR PILTGITLRL
APGDCIALIG PSGSGKSTLG RVIAGVVQAT SGCALLGGVD ISALRLCGGT RHVGYLPQDI
ELFGGAIKDV IGRLDGGDPG KAIDAAKLVG LHDAIMRLPQ GYETDIGEGG NLLLRAQRQQ
LGLARAAYGN PSLIVLDDPN SSLDYDGERM LFTAIERMKS RGMTVVIMTH RMGILPVTNK
IAIMRNGTVA AFGDSERIYE TYLQPPSRTG T
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