| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_0256 |
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| Symbol | |
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| ID | 8011477 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012850 |
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| Strand | + |
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| Start bp | 269319 |
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| End bp | 271280 |
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| Gene Length | 1962 bp |
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| Protein Length | 653 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644822849 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_002974106 |
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| Protein GI | 241203010 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAACT TTCTGGCCTC ATTGCAGCTG CAAAAAGACA ATCCGACGCT TCTGCTGGCG
CAGTTCCGGG CCCTGTCGTC GCAGATTCCC ATTCTCTATG TCCTTCTGGT CATCAACGCC
CTTGCGGTGG CGATCACCCA CCTCAAATCC GCCCCCCTTT GGCTCTCGCT CTACATTCCC
GTGGCCTTGA GCGTCGTCTG TGTCTTCCGT CTCTGCTGGT GGGAGATCCG CGGCAAGGAA
AACGTCACCG CCGAGCGGGC CTACAGGCTG ATGAAGCTCA CGATATCAGG GGCCGGCATC
CTGGCCGTCG CTTTCGGCAG CTGGGCGATC GCGCTCTACC AATATGGCGA TGCTTCCCAG
CAGGGTCAGA TCGCCTATTT CCTCGTCGTG ACCGGGATAT CCTGCATCTT TTGCCTGATG
CACCTGCCGA TGGCGGCAGC GCTGACCACG GTCATCACCT TCTCGGCCAT GGTCGCGACC
TTCTTGTTCT CGGGCAATCC CGTTTTCGTC GCGACGGCCA TTAGCGGCCT CTTCCTGATC
CTGCCCTTCC TCAGGGTGAT CAACAGCTAT TTCCAGAATT TCGTCGGTCT CGTGCAACTG
ACCGAAGAGC TGAAGCAGAA GCAGGCGGAA GCCGAAGAGC TGAACCTCGT CAACAGCCGC
AATGCGCTGC ATGACCAGCT GACCGGCCTT GCCAATCGCC GCAGCTTCTT TCTCTCGTTG
GAAAAACGGC TGCAGAAGGA TTCGTCGACG CCGCCCGTCC TCGGCATTCT CGATCTCGAC
GGCTTCAAGC CGGTCAACGA CGTCTTCGGC CATGCCGCCG GCGATCTCGT GCTGAAGGAG
ACGGCCCGCC GCTTCGTCGC GCTGGTCGGC GAAGAGGGCA TCGTCTCCCG TCTCGGCGGC
GATGAGTTCG GTATCATCTT TCCCTCCTTG ATGACGCGCC AGGCGATCGC CGATCTCGGC
CAGGCGCTCT GTGCTGCCGT CCGCGATCCT TTCGAAATCC CCGACGGCTC GGTCCGCGTC
TTCGGCTCCT GCGGCATCGT CTATCCTGAT ATTGGCACAT ACACCGCCGA GGATCTTTAC
GAGAAAGCCG ATTTTGCCCT CTACCAGGTC AAGAGCAAGC GCAGCAGCGG CGTCGAATTC
TTCTCGGCCG AGCACGAGAA GATCCTGACG CAGCGCCACC TGATCGAACT CGAACTGCAG
GCAAACGATT TCGCCAAGGA ATTGAAACTC GACTATCAGC CGATCGTCGA ATTGAGGAGC
GGCCGCGTCG TCGCCTACGA GGCGCTCGCC CGCTGGGACA GCGCCCGCTT CGGCCGTATC
AGCCCAGACG CCTTCATTCC CGCTGCCGAG CGCACGGCGG TCATCGGTCG CATAACCCGC
ATCCTCTTCG CCAAGGCGCT CGAAGCGCTG GCGATCATTC CACGGCATCT CAGGCTGTCC
TTCAATCTCT CGGCGCGCGA TATCTGCGAC CACGAGACCT CGATGGCGCT GCTCGCCATG
ATCACCCGTT CCGGCATCGA TCCGAAGCGC ATCGAATTCG AGATTACCGA GACCGCATTG
CTCTCCGATT TCGACACCGC CGATCAGGTG ATATCCATGC TGCGCGCTGC CGGCATCTCG
ATTGCGCTCG ACGATTTCGG CACCGGCTAT TCGAGCCTCA GCCATATTCA TCGTCTCGGC
TTCGACAAGC TGAAGATCGA CAAGTCGTTC GTGATGAATT TCGATCGAGA CGCCCGCTGC
ATGAACATCA CCCGCTCGGT CGCCAATCTC TGCCAGAACC TCGGCATCGC CTCCGTCGCC
GAAGGCGTCG AAAGCGAAGA GATTGCCGAG GGATTGAAGG CGATGGGCGT TCGTCTGGCG
CAGGGCTATC ATTTCTCGCG GCCGCTGCCG CTCGAACTTG CCATCGACTA CGCCGCCAGG
TGCGAGGCCG CAGCCTCCGC CCGCAATTCG CTGTCTGCCT GA
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| Protein sequence | MKNFLASLQL QKDNPTLLLA QFRALSSQIP ILYVLLVINA LAVAITHLKS APLWLSLYIP
VALSVVCVFR LCWWEIRGKE NVTAERAYRL MKLTISGAGI LAVAFGSWAI ALYQYGDASQ
QGQIAYFLVV TGISCIFCLM HLPMAAALTT VITFSAMVAT FLFSGNPVFV ATAISGLFLI
LPFLRVINSY FQNFVGLVQL TEELKQKQAE AEELNLVNSR NALHDQLTGL ANRRSFFLSL
EKRLQKDSST PPVLGILDLD GFKPVNDVFG HAAGDLVLKE TARRFVALVG EEGIVSRLGG
DEFGIIFPSL MTRQAIADLG QALCAAVRDP FEIPDGSVRV FGSCGIVYPD IGTYTAEDLY
EKADFALYQV KSKRSSGVEF FSAEHEKILT QRHLIELELQ ANDFAKELKL DYQPIVELRS
GRVVAYEALA RWDSARFGRI SPDAFIPAAE RTAVIGRITR ILFAKALEAL AIIPRHLRLS
FNLSARDICD HETSMALLAM ITRSGIDPKR IEFEITETAL LSDFDTADQV ISMLRAAGIS
IALDDFGTGY SSLSHIHRLG FDKLKIDKSF VMNFDRDARC MNITRSVANL CQNLGIASVA
EGVESEEIAE GLKAMGVRLA QGYHFSRPLP LELAIDYAAR CEAAASARNS LSA
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