Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_0252 |
Symbol | |
ID | 8011473 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | - |
Start bp | 262483 |
End bp | 266007 |
Gene Length | 3525 bp |
Protein Length | 1174 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644822845 |
Product | PAS/PAC sensor hybrid histidine kinase |
Protein accession | YP_002974102 |
Protein GI | 241203006 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0591] Na+/proline symporter |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.854881 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTCCAG GCTGGGTCAT ATTCGCGTCT GCCTTCGGCT ATCTGCTCCT GCTTTTCGCC GTGGCAAGCT ATGGCGACCG CAAGAACCGC AGCCCGGGTA CGCTCGACCG CGGCCGGGGC ACGCTGGAAG GCGGATGGCC GGTGGTCTAT GCGCTGAGCC TTGCGATCTA TTGTACCTCC TGGACCTATT TCGGCAGCGT CGGGCTTGCG GCGCAGCGCG GCCTGGAATT TGCCGGCATC TATATCGGCC CTATCCTGGT CTTCACGCTC GGCATGCCGC TGCTTCGCCG CATCATCGAG CTTGCCAAGG CGGAGAAGCT CACCTCGGTT GCCGATTTCG TCGCCGCCCG TTACGGCAAG AACCCGACGG TCGCAACGAT CGTCGCCCTG ATCTCGCTGA TCGGCGCCAT TCCCTATATC GCGCTGCAGC TCAAGGCGAT CTCGAGCACC GTCAGCGCCA TGGTCAATCC GTCCGATTAC GGCATCGGCA GCGGCAATCT CTATTTTCTC GACCTGCCGC TCGTCGCAAC GCTGGTGCTT GCCTGTTTCG CCATCATGTT CGGCACACGG CATACGGATG CGACAGAGCA TCAGGATGGC CTCATCCTCG CCGTCTCGAT GGAATCCGTC GTCAAGCTCG TCGCTTTCCT GACGGCCGGC GTCTGCGTCA TCTGGTTTCT GTTCGACGGT CCGACCGATC TCTGGCGCAG GACCGTCGAC AATGAGCTGG TCATGTCGGC GCTCAACTAC CATACGCCGA TCAGCCGCTG GATCACCCTG ATCATCTTGT CGGCCTTTGC GATCATCCTG CTGCCGCGGC AATTCCACGT GACGGTTGTC GAAAACCGAA CCCCGAAACA GCTGAAACTC GCAGGCATCC TGTTTCCCAG CTATCTCATC GCCATCAATC TCTTCGTGCT GCCGGTGGCG ATCGGCGGGC TGCTGACCTT CGGCGGCAGC GGCAATGCCG ATTTCTACAT GCTGTCGCTG CCGCTTGCCG GCCAGATGCC CGTCATTTCG CTGATCATCT TCATCGGCGG GTTCTCCGCC GCGACGGCGA TGGTCATCGT CGATTCCGTC GCACTGTCGA TCATGGTGTC AAACGACATC ATCATGCCGA TCTTCCTCAG GCGCAAACTC GCCGGCCGCG CCAGCCTGCG CGACAATTTC GCCAAGACGT TGCTCAACAT CCGCCGCAGC GCCATTTTCG CCGTGCTGCT GTTCGGCTAT GCCTATTACC GTTCGACCGA CAGCACGGCA GGCCTTGCCT CGATCGGCCT TCTTTCCTTT GCCGCGATCG CGCAAATCGC CCCAGCACTG TTCGGCGGGC TGATCTGGCG GCGGGCGAAC GCGCGCGGCG CAATCCTCGG GCTTTCCTCC GGCTTCATCA TCTGGATCTA CCTGCTGTTC CTGCCCTCGC TCGGCGGCCC CGACTATTCC TATGTGGCGA GCGCCGTGCT CGGCTTCATC TTTCCCGGGA CGACGTTGTT CACCGCGCCC GACGCCGATC CGCTGGTCAA TGCGACGGCA ATGAGCCTGC TCGTCAACAC CGCTTTCTTC GTCGTCGGGT CGCTCACCCG CAACGCCAAG CCGCTGGAGC GCATCCAGGC CGGTATCTTC GTCAAACGGC ATTCGCGCTC GCAATTTGCC ACGCGCGGCT GGAAGACCCG CATTAGCGTC GGCGATCTCA AGGCGGCGAT CTCGCGCTAT CTCGGCGAAG AGCGCATGCA GCGCTCGTTG ACGACCTACG AACAAAGCTC CGGCCGCAAG CTGGAAGACG AGCAGCCGGC CGACATGGCG CTCATCCATT TTAGCGAACA GCTGCTCGGC AGCGCCATCG GCTCGTCCTC GGCCAGGCTG GTGCTGTCAT TGATCCTGCA GAAGATCGAG GATGCCTCTT CCGATACCGC CTGGCTGCTC GACCAGGCGA GCGAGGCGCT GCAATATAAC CAGGACATGC TGCAGACGGC GCTTTCGCAG ATGGACCAGG GCATTGCGGT CTTCGACAGT TCCAATCGGC TGACGATCTG GAACCGGCGT TTCCGGCAAT TGCTGGATCT TCCGGAAAGT GCCGGCCAGG TCGGTTTTCC CTTGTCTGAT ATCGTCACCA CGCTTATCCA GCGCGGCGAT ATCGCGCCCG GCGATCTCAG CCAGACGGTG CGGCATTTCC TGACGCTCGA CAAGCCCTTT TCGCTGGTGC TCGGCGGCGG CGAGCGGATC ATCGAGGTGC GCTCCAACGC CATGCCCGAC AAGGGCATCG TTGCCACCTT CACCGACATC ACCCAGCGCG TCAGCGCCGA CCAGGCACTG AAACAGGCGA ATGAAACGCT GGAGCAGCGC GTCGCCGAAC GCACGGCCGA GCTTACCCGG GTCAACCGCG AACTCGGCGA GGCGCGCGCC GCCGCCGATG AGGCGAATAT CGGCAAGACA CGCTTTTTCG CCGCCGCCGG CCACGATATC CTGCAGCCGC TCAATGCCGC CAGGCTCTAT TCCTCGGCAT TGGTCGAGCG CATGGCGCAA TCCGAGAACA GCCTGATCGT GCGCAACATC GATTCCGCGC TGGAATCGGT CGAGACCATT CTCGGGGCGG TGCTCGATAT ATCCAGGCTC GATACCGGCG CCATGCGGCC GCGGCTCGCC TCCGTCGCGC TCTCCGACCT GCTGGAGCGT ATCCAGACCG ATTTCGCGCC GATCGCCCGT GAAAAACAGC TGAAGCTGGT GATCATGCCG ACCTCATTGC GGGTCCGCTC CGACCCCAAC CTGCTGCGCC GGCTGGTGCA GAACCTTGTC TCCAACGCCA TCAAATACAC GATTTCAGGC AAGGTGCTGG TGGGCGCGCG ACGGCGCGGC AACCAGGTGA TCATCCAGGT CATCGATTCC GGCATCGGCA TTCCGCCGTC GAAATTCCGC ACCGTGTTCA AGGAATTCGC GCGGCTGGAC GAAGGCGCGA AAACCGCCTC CGGCCTCGGG CTCGGCCTGT CGATCGTTGA CCGTATCGCC CGCGTGCTCA ACCATCCGGT CGAGCTGCAG TCGACGCATG GCAAGGGCAC GGAATTCCGT ATCGCCATGC CGCTCGACGT CTCGCGCCCG GCCGCGGCCA CGGCGGCAAT CACGCCTGCC GACCGTCCCG GCCAGCCGCT GAGCGGGTTG AAGATCCTCT GCATCGACAA CGAGCCGAAG ATCCTCGAAG GCATGCGGCT CTTGATCAGC GGCTGGGGCT GCGAGGTGGA GGCGCTGGAT TGCCTCGCCG ACGTCATCGC CCTCGACGGC CAGGAGGGAC CACCTGATAT CGTCATCGCC GATTATCATC TCGGCGACGG CACCGGCATT GCCGCCATCC TGCATCTGCG CCGGCAGTTC GGCGCCGATA TCCCCGCTTT GCTGATCACG GCCGACCGCA CGCCGGAGGT GCGCAGCGAG GCCGAGCGAG ATGGTATCGC CGTCCAGCAC AAGCCGGTGC GGCCGGCGGC GCTACGCGCC TATATCACCC AGATTTCCGG CCTCAAGCGC GCCGCCGCGG AGTAA
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Protein sequence | MLPGWVIFAS AFGYLLLLFA VASYGDRKNR SPGTLDRGRG TLEGGWPVVY ALSLAIYCTS WTYFGSVGLA AQRGLEFAGI YIGPILVFTL GMPLLRRIIE LAKAEKLTSV ADFVAARYGK NPTVATIVAL ISLIGAIPYI ALQLKAISST VSAMVNPSDY GIGSGNLYFL DLPLVATLVL ACFAIMFGTR HTDATEHQDG LILAVSMESV VKLVAFLTAG VCVIWFLFDG PTDLWRRTVD NELVMSALNY HTPISRWITL IILSAFAIIL LPRQFHVTVV ENRTPKQLKL AGILFPSYLI AINLFVLPVA IGGLLTFGGS GNADFYMLSL PLAGQMPVIS LIIFIGGFSA ATAMVIVDSV ALSIMVSNDI IMPIFLRRKL AGRASLRDNF AKTLLNIRRS AIFAVLLFGY AYYRSTDSTA GLASIGLLSF AAIAQIAPAL FGGLIWRRAN ARGAILGLSS GFIIWIYLLF LPSLGGPDYS YVASAVLGFI FPGTTLFTAP DADPLVNATA MSLLVNTAFF VVGSLTRNAK PLERIQAGIF VKRHSRSQFA TRGWKTRISV GDLKAAISRY LGEERMQRSL TTYEQSSGRK LEDEQPADMA LIHFSEQLLG SAIGSSSARL VLSLILQKIE DASSDTAWLL DQASEALQYN QDMLQTALSQ MDQGIAVFDS SNRLTIWNRR FRQLLDLPES AGQVGFPLSD IVTTLIQRGD IAPGDLSQTV RHFLTLDKPF SLVLGGGERI IEVRSNAMPD KGIVATFTDI TQRVSADQAL KQANETLEQR VAERTAELTR VNRELGEARA AADEANIGKT RFFAAAGHDI LQPLNAARLY SSALVERMAQ SENSLIVRNI DSALESVETI LGAVLDISRL DTGAMRPRLA SVALSDLLER IQTDFAPIAR EKQLKLVIMP TSLRVRSDPN LLRRLVQNLV SNAIKYTISG KVLVGARRRG NQVIIQVIDS GIGIPPSKFR TVFKEFARLD EGAKTASGLG LGLSIVDRIA RVLNHPVELQ STHGKGTEFR IAMPLDVSRP AAATAAITPA DRPGQPLSGL KILCIDNEPK ILEGMRLLIS GWGCEVEALD CLADVIALDG QEGPPDIVIA DYHLGDGTGI AAILHLRRQF GADIPALLIT ADRTPEVRSE AERDGIAVQH KPVRPAALRA YITQISGLKR AAAE
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