| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_0210 |
|---|
| Symbol | |
|---|
| ID | 8011437 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | + |
|---|
| Start bp | 221486 |
|---|
| End bp | 222634 |
|---|
| Gene Length | 1149 bp |
|---|
| Protein Length | 382 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644822803 |
|---|
| Product | transcriptional regulator, AraC family |
|---|
| Protein accession | YP_002974060 |
|---|
| Protein GI | 241202964 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.278356 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.347271 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTACAG GGTCTGAATC CGACGATGAT CCTGCCGCGG AACAGGAACG GCCGGCGCAT
ATGGAGCGGC GGCGCTGGCC GCGTGAACCG GCCATGCGCA AGGAACGCCC GCCCCATGCC
TCCCCTGCAC TCGTGCCGCT GCGATTCTCG ACGCAGGACC TACCACCGGC AGAACAATTC
CAGGCCTGGC GGGCACATAT GGCGCCGCTC GTGGATGTTC ATCTGCCGGA GGGAAAATCA
CCGGAAGACG GGTTCCTCGC GGAGCAGATC GGCTGGCATC TCGGCGATAT CCTGATCGTC
CAGCAGCGCG CGCATGCCCA CAGATATGTC CGCGATCAGG CCATGCTTCG ATCGAGCCCT
ATCGACCATT GGAACGTCGG CCTGCAGCGC AGCGGCCAGG CCTGGACCGA GGTCAACCGT
CGTGTCACCG AGACCGGTGC CGGCGAGATA TTTTTCATGT CGCTCGGCAG CCCCTATCGC
GGACGGACGA CCGATACCGA AGCTTTGCTC GTGTTCCTGC CGTATGAGAT GCTGGCTCGC
GATGCGAGCC TTCTCCAGAG CGCCGGCAAC ACGGTTCTTT CGGGCAGCCA CGCCGAGTTG
CTCACGGGCT ATCTCACGGG CCTCGAAACG AACCTCGGGA ATCTGACGAT AGAGGAAGTG
CCCCGGATCA TTCAAACCAT CGGCGATATG GTCGTTGCGG GCGCCGCATC GTCCACAAGG
ACTGATACCG GTCAAAACCA GGCCAACATG GGACTGATGG AGCGGGCGCA CCGCTACATT
CACGTCAATC TCCATTCGGA AAACTTGACA CCGGACGTGA TGTGCCGCGC GTTGGGGATT
TCGCGAACGC GGCTTTATCA ACTGTTTGAG GCGAGCGGAG GCGTGCTCAA TTATATTCGC
AAGCGGCGAT TGCTGCAGGC CTATGCGGAT CTCAGCAATT CGGCCGACCA CAGGCCGATT
TCAGAAATCG CAGAAGCCGC CGGTTTCGAG GTCGCCGCCA ATTTTACGCG CGCCTTCATC
CACGAATTCG GGCTGAGCCC GCGTGAAATC CGAAGGACGA TGGCAACCCA ACAGCGGCCG
GCTCCGGCCA TCCGCTCCAC GCGGCGTTAC GAAAAAACGA TCGGTGATTG GCTGGCCCTG
ACGGGTTGA
|
|---|
| Protein sequence | MATGSESDDD PAAEQERPAH MERRRWPREP AMRKERPPHA SPALVPLRFS TQDLPPAEQF
QAWRAHMAPL VDVHLPEGKS PEDGFLAEQI GWHLGDILIV QQRAHAHRYV RDQAMLRSSP
IDHWNVGLQR SGQAWTEVNR RVTETGAGEI FFMSLGSPYR GRTTDTEALL VFLPYEMLAR
DASLLQSAGN TVLSGSHAEL LTGYLTGLET NLGNLTIEEV PRIIQTIGDM VVAGAASSTR
TDTGQNQANM GLMERAHRYI HVNLHSENLT PDVMCRALGI SRTRLYQLFE ASGGVLNYIR
KRRLLQAYAD LSNSADHRPI SEIAEAAGFE VAANFTRAFI HEFGLSPREI RRTMATQQRP
APAIRSTRRY EKTIGDWLAL TG
|
|---|
| |