Gene Rleg_0174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_0174 
Symbol 
ID8011404 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp171262 
End bp172221 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content66% 
IMG OID644822766 
Product2-nitropropane dioxygenase NPD 
Protein accessionYP_002974024 
Protein GI241202928 
COG category[R] General function prediction only 
COG ID[COG2070] Dioxygenases related to 2-nitropropane dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.111735 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCTGC CCCCGATCCT CAAGGACAGA TTGAGACTGC CGGTCATCGG TTCGCCGCTG 
TTCATCATTT CGCATCCAGC GCTGACGCTG GCGCAATGCA AGGCCGGCAT CGTCGGAGCG
TTTCCGGCGC TGAACGTCCG GCCGGAAAGC CAGCTCGACG AATGGCTGGC GGAGATTACC
GAGGAGCTCG CCCGCCACGA CGCCGCCCAT CCGGAGCGGC CGGCCGCCCC CTTTGCCGTC
AACCAGATCG TCCACATGTC GAACAAGCGG CTGGAGCACG ACCTCTCGCT CTGCGTCAAA
TACAAGGTGC CGATCGTCAT CTCCTCGCTC GGCGCCGTGC CCGAAGTCAA CGCCGCCGTG
CACTCCTATG GCGGCATCGT GCTGCACGAC ATTATCAATA ACCGCCACGC CCATTCGGCG
ATCCGCAAGG GTGCGGACGG GCTGATCGCG GTGGCGGCCG GCGCCGGCGG CCATGCCGGG
ACGTTGTCGC CCTTTGCGCT CGTCCAGGAA ATCCGTGAAT GGTTCGACGG GCCGCTGCTG
CTGGCAGGCG CCATCGCCAC CGGCGGCGCT ATTCTCGCCG CAGAAGCGAT GGGCGCCGAC
ATGGCCTATA TCGGCTCGCC CTTCATCGCC ACCGAGGAAG CCCGCGCCGC AGCCGCCTAC
AAGCAGGCGA TCGTCGAAGG GGCCGCCAGC GATATCGTCT ATTCCAACTA TTTCACCGGC
GTGCACGGCA ACTATCTCAA GCCCTCGATC CTCGCCGCCG GCATGGACCC CGACAACCTG
CCGCTTGCCG ATGTCTCGAA GATGGATTTC GAGCAGGCTG TCGGCGGCGC CAAGGCCTGG
AAGGACATAT GGGGCAGCGG CCAGGGCATT AGCGCCGTCA AGGCCGTCGA GCCGGTGGCA
AAACTCGTCG ACCGGTTGGA GGCCGAATAC AGGGCGGCGC GCACCCGGCT GGCGCTCTGA
 
Protein sequence
MALPPILKDR LRLPVIGSPL FIISHPALTL AQCKAGIVGA FPALNVRPES QLDEWLAEIT 
EELARHDAAH PERPAAPFAV NQIVHMSNKR LEHDLSLCVK YKVPIVISSL GAVPEVNAAV
HSYGGIVLHD IINNRHAHSA IRKGADGLIA VAAGAGGHAG TLSPFALVQE IREWFDGPLL
LAGAIATGGA ILAAEAMGAD MAYIGSPFIA TEEARAAAAY KQAIVEGAAS DIVYSNYFTG
VHGNYLKPSI LAAGMDPDNL PLADVSKMDF EQAVGGAKAW KDIWGSGQGI SAVKAVEPVA
KLVDRLEAEY RAARTRLAL