Gene Rleg_0087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_0087 
Symbol 
ID8011329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp83458 
End bp83997 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content60% 
IMG OID644822677 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_002973937 
Protein GI241202841 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGGCG ATGACATCGC AGACCTGATC GGCCGCGTCG CACTCGGCGA TCGCAGGGCT 
TTCGTGGCCC TCTACAATCA GACCGGACCG AAACTTTTCT CGATCTGCCT GCGTATCTTG
AAGGATCGCA CGGAAGCCGA GGAAGCCCTG CAGGAAGCCT ATATCAGCAT CTGGCAACGC
GCTCGCAGCT TCTCCGTCGC CTCGGGTTCG TCCTCGGCAT GGCTGGCTGC AATTGCCCGC
AACCGGTCGA TCGATGCGCT GCGGGCGCGC AAGCCCGTCG CCGACGAATT GGACACGGTC
TATGATCTGG CCGATGCCGG AGCCGACCCG GAAATGCAGA CGGTGACCAA GGATGAAGGA
AGGCGGATTG ACACCTGCAT GGAAGAGTTG GAAGCTGATC GTGCGGTCGC CGTGAAACGG
GCTTATGTCG AAGGGCTGAG CTATCAGGAA CTGGCCGATC AGTTTGGTAT TCCGCTGAAC
ACGATGCGGA CCTGGCTCAG GCGCAGCCTC TTGAAACTGA GAGAGTGCAT GGAACGATGA
 
Protein sequence
MQGDDIADLI GRVALGDRRA FVALYNQTGP KLFSICLRIL KDRTEAEEAL QEAYISIWQR 
ARSFSVASGS SSAWLAAIAR NRSIDALRAR KPVADELDTV YDLADAGADP EMQTVTKDEG
RRIDTCMEEL EADRAVAVKR AYVEGLSYQE LADQFGIPLN TMRTWLRRSL LKLRECMER