Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_0087 |
Symbol | |
ID | 8011329 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | + |
Start bp | 83458 |
End bp | 83997 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644822677 |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_002973937 |
Protein GI | 241202841 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGGCG ATGACATCGC AGACCTGATC GGCCGCGTCG CACTCGGCGA TCGCAGGGCT TTCGTGGCCC TCTACAATCA GACCGGACCG AAACTTTTCT CGATCTGCCT GCGTATCTTG AAGGATCGCA CGGAAGCCGA GGAAGCCCTG CAGGAAGCCT ATATCAGCAT CTGGCAACGC GCTCGCAGCT TCTCCGTCGC CTCGGGTTCG TCCTCGGCAT GGCTGGCTGC AATTGCCCGC AACCGGTCGA TCGATGCGCT GCGGGCGCGC AAGCCCGTCG CCGACGAATT GGACACGGTC TATGATCTGG CCGATGCCGG AGCCGACCCG GAAATGCAGA CGGTGACCAA GGATGAAGGA AGGCGGATTG ACACCTGCAT GGAAGAGTTG GAAGCTGATC GTGCGGTCGC CGTGAAACGG GCTTATGTCG AAGGGCTGAG CTATCAGGAA CTGGCCGATC AGTTTGGTAT TCCGCTGAAC ACGATGCGGA CCTGGCTCAG GCGCAGCCTC TTGAAACTGA GAGAGTGCAT GGAACGATGA
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Protein sequence | MQGDDIADLI GRVALGDRRA FVALYNQTGP KLFSICLRIL KDRTEAEEAL QEAYISIWQR ARSFSVASGS SSAWLAAIAR NRSIDALRAR KPVADELDTV YDLADAGADP EMQTVTKDEG RRIDTCMEEL EADRAVAVKR AYVEGLSYQE LADQFGIPLN TMRTWLRRSL LKLRECMER
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