| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_0078 |
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| Symbol | |
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| ID | 8011322 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012850 |
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| Strand | - |
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| Start bp | 74446 |
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| End bp | 75639 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644822668 |
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| Product | succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_002973928 |
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| Protein GI | 241202832 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01246] succinyl-diaminopimelate desuccinylase, proteobacterial clade |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.191051 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCTA CCGACCCCGT CGCCAATCTC CAGACGCTGA TTCGCTGCCC GTCCGTGACG
CCCGCCGAAG GCGGCGCGCT CACGGCGCTG GAGGCGATGC TTGCGCCGCT CGGCTTTGCG
CTCGACAGGG TGAAGGCGAG CGAAGAGGGA ACACCCGAGA TCGAAAACCT CTATGCCCGC
CTCGGCAAGG ACGGCCCGCA TCTGATGTTT GCCGGCCATA CCGATGTCGT GCCGGTCGGC
GACGAAGCTG CCTGGACGCA TCCACCGTTT GAGGCCCAGA TTTCGAAGGG CGAGCTTTTC
GGCCGCGGCG CCGTCGACAT GAAGGGCGGC ATCGCCTGTT TCGTCGCCGC CGTCGCCCGC
CATATCGAGA AAAACGGGCC GCCCAACGGC TCGATTTCCT TTTTGATCAC CGGCGACGAA
GAGGGCCCGG CGATCAACGG CACGATCAAG CTGCTGCAAT GGGCGGCCGA GCGCGGCGAG
CGCTGGGATG CCTGCCTTGT CGGCGAGCCG ACCAATCCGG ACAGGCTCGG CGACATGATC
AAGATCGGCC GGCGCGGCTC GCTGTCGGGT AAAATCACCG TGCACGGCGT GCAGGGCCAT
GCCGCCTATC CGCATCTTGC CGACAATCCG GTGCGCGGCA TGCTGCAGCT GACGCAGGCG
CTGATGGACC CGCCGTTTGA CGCCGGCACC GGCGATTTCC AGCCTTCGAA CCTCGAAGTG
ACCACGGTCG ACGTCGGCAA CCCGGCGACC AACGTCATTC CGGCCAAGGC ATCGGCAAGC
TTCAACATCC GCTTCAACGA TAGCTGGACC GTCGAAACGC TGCGGGCCGA AATCCTGCGC
CGTCTGGAAG CCGCCGCCGG CAACGGCGCA TTGCGGCCGG GCCGCGATCC GGTGGCCTAT
GATATCGTCT GGGCCGACCG GCCGAGCCAT GTCTTCCTGA CGCGCAACAA TGCGCTGATC
GCCTCACTGT CTTCAGCCGT CGAAAGTGTT GCCGGCCAGT CGCCGCGGCT TTCGACCACC
GGCGGCACAT CGGATGCGCG CTTCATCAAG GATTATTGCC CGGTCGTCGA GTTCGGCCTC
GTTGGCCAGA CCATGCACAT GGTCGACGAG CGCGTCGCTG TCGCTGATCT GGAGACGCTG
ACGGCAATCT ACGAAACTTT CATCGCCCGC TGGTTCGCCA ATGCCGGGCT TTAG
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| Protein sequence | MTATDPVANL QTLIRCPSVT PAEGGALTAL EAMLAPLGFA LDRVKASEEG TPEIENLYAR
LGKDGPHLMF AGHTDVVPVG DEAAWTHPPF EAQISKGELF GRGAVDMKGG IACFVAAVAR
HIEKNGPPNG SISFLITGDE EGPAINGTIK LLQWAAERGE RWDACLVGEP TNPDRLGDMI
KIGRRGSLSG KITVHGVQGH AAYPHLADNP VRGMLQLTQA LMDPPFDAGT GDFQPSNLEV
TTVDVGNPAT NVIPAKASAS FNIRFNDSWT VETLRAEILR RLEAAAGNGA LRPGRDPVAY
DIVWADRPSH VFLTRNNALI ASLSSAVESV AGQSPRLSTT GGTSDARFIK DYCPVVEFGL
VGQTMHMVDE RVAVADLETL TAIYETFIAR WFANAGL
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