| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_0060 |
|---|
| Symbol | |
|---|
| ID | 8015390 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | - |
|---|
| Start bp | 58819 |
|---|
| End bp | 59769 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 644822650 |
|---|
| Product | signal peptide peptidase SppA, 36K type |
|---|
| Protein accession | YP_002973910 |
|---|
| Protein GI | 241202814 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
|---|
| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACAGTT CGATCATCGC CGATCGCCGG CGGCTGCGTC GTAAGCTCGG CTTCTGGCGC
GTCATCGCGG TGGCCCTCAT CGTGGCACTT GGTTTCGCCT TCTACCGCTT TGCCCTCGGC
GATGCCGGGA CGGAGCGCCC GCACATCGCC CATGTGACGA TATCCGGGCT GATCGTCGAT
GACGACGAGC TTCTGGAGCG GCTGAAGAAG GTCGAGATCA GCGATCAGGT GAAGGCAGTG
GTGATTTCGA TCTCCTCGCC CGGCGGCACG ACCTATGGCG GCGAAAAAAT CTTCAAGGCG
ATCCGTGCAA TCTCTGCCAA GAAGCCTGTC GTCTCCGACG TGCGCACGCT TGCCGCCTCC
GCCGGCTACA TGATCGCCAC CGCCGGCGAT ACGATCATTG CCGGCGACAG CTCGATCACC
GGCTCGATCG GCGTCATCTT CCAGTATCCG CAGATCCAGC CGCTGCTCGA CAAGATCGGC
GTCTCGCTGC AGGAAATCAA GTCCTCGCCG CTGAAGGCCG AGCCCTCGCC CTTCCACGAG
GCAAGCGAGG AAGCCAAGGC GATGATCCGC AACATGGTGG TCGACAGCTA TAACTGGTTC
GTCGACCTGG TCGCCGACCG GCGCAAGCTG CCGCGCGACG AGGTGCTGAA ACTGGCCGAC
GGCACGATCT ATACCGGCCG CCAGGCGCTG AAGGTGAAAC TTGTCGATGC AATCGGCGGC
GAGGCTGAGA TCCGCGCCTA TCTGACGTCA CGCGGCGTCG ACAGTGATCT GCCCATGGTG
GACTGGGACA AGAAGAGCAA TACGCCCTTT CTGCTCGCTG GGGCTGTTTC TCGGTTGATT
ACGATCTTCG GTTATGATGA TCTCATGAAA ACCCAGGATA TCAATGGAAT CCTGCCCCCA
AAGTTGCTTC TTGACGGGCT GCTTTCAGTT TGGCAGGTTG GCCACGATTG A
|
|---|
| Protein sequence | MDSSIIADRR RLRRKLGFWR VIAVALIVAL GFAFYRFALG DAGTERPHIA HVTISGLIVD
DDELLERLKK VEISDQVKAV VISISSPGGT TYGGEKIFKA IRAISAKKPV VSDVRTLAAS
AGYMIATAGD TIIAGDSSIT GSIGVIFQYP QIQPLLDKIG VSLQEIKSSP LKAEPSPFHE
ASEEAKAMIR NMVVDSYNWF VDLVADRRKL PRDEVLKLAD GTIYTGRQAL KVKLVDAIGG
EAEIRAYLTS RGVDSDLPMV DWDKKSNTPF LLAGAVSRLI TIFGYDDLMK TQDINGILPP
KLLLDGLLSV WQVGHD
|
|---|
| |