| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_0029 |
|---|
| Symbol | |
|---|
| ID | 8011276 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | - |
|---|
| Start bp | 26907 |
|---|
| End bp | 27422 |
|---|
| Gene Length | 516 bp |
|---|
| Protein Length | 171 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 644822619 |
|---|
| Product | protein of unknown function UPF0054 |
|---|
| Protein accession | YP_002973879 |
|---|
| Protein GI | 241202783 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0319] Predicted metal-dependent hydrolase |
|---|
| TIGRFAM ID | [TIGR00043] metalloprotein, YbeY/UPF0054 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.0226276 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGAAC TCGACATCCA GATCAGCGTC GAGGACATCG GCTGGCCCGG CGAGGAGACG
CTGCTGTCGT TTTGCGAACG CGTGCTCGGC GCAGCAGTGG TCTATCTCAG CGACAGCGAG
AAGCAGCCCT TCCCGACGTT GCCGCCCGAG GTTTCGCTTG TTTTCACCGA CGATGCCTCG
ATCCAGGACA TCAATGCGGA ATGGCGCGGC AAGGACAAGG CGACCAACGT GCTCTCCTTT
CCGGCCTTTC CGGTTCAGCC CGGCAAGATG CCCGGCCCGA TGCTCGGCGA CATCATCATC
GCCCGGGAGA CGCTGGAGCG GGAAGCGGCC GAGCTCGAAA AGAGTTTCGA CGACCACCTG
ACCCATCTTC TGGTGCACGG TTTCTTGCAT CTTCTCGGCT ACGACCATAT GAATAGTGCC
GAAGCCGAAA TTATGGAGGG GCTGGAGACT CGCATTTTGG CCCAGCTCGG CCTATCTGAT
CCCTACGAGG GTCAAGACCT TAAAATGGAA CCATGA
|
|---|
| Protein sequence | MAELDIQISV EDIGWPGEET LLSFCERVLG AAVVYLSDSE KQPFPTLPPE VSLVFTDDAS
IQDINAEWRG KDKATNVLSF PAFPVQPGKM PGPMLGDIII ARETLEREAA ELEKSFDDHL
THLLVHGFLH LLGYDHMNSA EAEIMEGLET RILAQLGLSD PYEGQDLKME P
|
|---|
| |