Gene Rleg_0023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_0023 
Symbol 
ID8011271 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp22088 
End bp22723 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content55% 
IMG OID644822614 
ProductNAD(P)H dehydrogenase (quinone) 
Protein accessionYP_002973874 
Protein GI241202778 
COG category[I] Lipid transport and metabolism 
COG ID[COG1182] Acyl carrier protein phosphodiesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.00721211 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGAGTGC TTCATGTCAG CTGCAGTCCT CGCGGGGAAG CATCCGAGAG CTATCGACTC 
TCGCAACAGA TCATCAGCCA GTTGCGGCAG AGCGATCCCG ACACAACGGT AATCGACCGT
GTGATTGGCC AAGGCGTCAT CCCGCCGATC GACGAGGATT ACGCGGTTTC CCAAGGCTCC
TCCAAAGACG TGTCTCAACT CGGATCCATG GCCAAGTCTG AGGAGTTGAT ACTGGAGCTG
GAAACTGCGG ACGTCGTGGT CATTTCTACG CCAATGCATA ATTTGACGCT CCCCGCGACC
TTGAAGTTGT GGATCGATCA TATCGTTCGA ACGCGGAGGA CCTTCAATAT CAGCAAGTTT
GGAAAGGTCG GGACGCTACA GGATCGCCCC GTCTTCGTCG CCATCTCCTC GGGCGGTCGA
TTCTCCGGTG AGCACCCGCA GCAACCCGAC TTTCTCACGC CATACCTGAC AGCAATCCTA
GGCATGATCG GCCTACATAA CGTAGCGATA TTCTCGGTCC AAGGAACAGG CTCGCACGTC
AATGAGCTTG CTTCGATAAG ACGCAACACG GATCAATTGG TCCGAGAACA CTTTGCCTCT
TTCCATCCCG ATCTGATCGC GGTGCCAACT TACTGA
 
Protein sequence
MRVLHVSCSP RGEASESYRL SQQIISQLRQ SDPDTTVIDR VIGQGVIPPI DEDYAVSQGS 
SKDVSQLGSM AKSEELILEL ETADVVVIST PMHNLTLPAT LKLWIDHIVR TRRTFNISKF
GKVGTLQDRP VFVAISSGGR FSGEHPQQPD FLTPYLTAIL GMIGLHNVAI FSVQGTGSHV
NELASIRRNT DQLVREHFAS FHPDLIAVPT Y