Gene Rleg_0017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_0017 
Symbollnt 
ID8011265 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp13939 
End bp15543 
Gene Length1605 bp 
Protein Length534 aa 
Translation table11 
GC content63% 
IMG OID644822608 
Productapolipoprotein N-acyltransferase 
Protein accessionYP_002973868 
Protein GI241202772 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0815] Apolipoprotein N-acyltransferase 
TIGRFAM ID[TIGR00546] apolipoprotein N-acyltransferase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.00536194 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAGCGGC TTGCGGACAG GGTTATCCTC GTCTGGGGTT TCAAACGGTC GCTGCTGGCC 
ATCGCCGCCG GGGCCTTCGC GGTGCTGGCG CTGCCGCCCA TCGGCTTTTT CGCGGCGATG
TTCGTTTCCT TCACGCTGCT CGTCTGGCTG ATCGACGGGG CGGCGGCTTC GCCTGAAAGC
GGCCTGATCG GCAGGCTGTG GCCGGCGTTT GCCACCGGCT GGCTGTTCGG TTTCGGCTAT
TTCGTCGCCG GCCTCTGGTG GGTTGGCCAT GCGCTGCTGG TCGATCAGGA AGAATTCGCC
TGGGCGCTGC CGCTGGCAAT CCTCGGGCTG CCGGCCTGTC TTGCGATCTT CTACGGGCTG
GCGGCCGCCC TTGCCCGCAT CTTCTGGTCT GATGGCATGG GGCGGATCGC CGCGCTTGCG
GCAGGCTTCG GGCTGATGGA ATGGCTTCGA AGCGTGATCC TCACCGGCTT TCCCTGGAAC
GCCATCGGCT ACGGCATGAT GCCGGTTCCG CTGATGATGC AGTCGGCGCA TCTGATCGGG
GCGATGGGCG TGACGGCCCT TGCCGTCTTC GTCTTTTCCG CGCCTGCCCT TGCCGGGACG
CGGCAAGGGG CGCGGCCGGG CATCGCGCTC GCCGTCCTGC TCTTTGCCGC CCATCTGGGT
TATGGCGCTT ACGCTCTCCA TCTCGCGCCG CGGCCGGACA TATTGCCTGA GGACAAGCGG
CCGGTGGTGC GGCTGGTGCA GCCGGCGATC GACCAGACAG AGAAAATGGA TAACGACGTC
GACCGCGCCA CGATCTTCGA GACGCATCTG AAGCTCTCGG CCGAAGCGCC GAAGAATGGC
GGGCGCAAAC CCGACATCAT CGTCTGGCCG GAAACCTCGA TCCCCTTCAT CCTGACCGAC
AACCAGGATG CGCTGACGCG GATTGCCGAT ACGCTCGACG ACAATCAGAT CCTGATTGCC
GGCGCCGTAC GCGCCGAGGA GATGGGACCG GGTACGCCGC CGCGCTACTA TAATTCCATC
TACGTGATCG ACGGCCGCGG ACAGATCATC GCCGCCTCCG ACAAGGTGCA TCTGGTGCCC
TTCGGCGAGT ATCTGCCCTT CGAGGACGTG CTCACCGAAT TCGGCATCCA GAACGTCGTC
GAGGTTCCGG GCGGCTTTTC GGCCGCGGCA AGCCGGCACC TGCTGGCGCT GCCCGGCGGG
CTCAATCTCT ATCCGCTGAT CTGCTACGAG ATCATTTTTC CCGGCGAAAT GACCGGTGAC
ATTAAAGACG CCAACGCAAT CCTCAATATC ACCAATGATG CCTGGTTCGG CTTGACGCCC
GGCCCCTACC AGCATTTCCA GCAGGCGCGC GTGCGGGCTG TCGAAACCGG CCTGCCGTTG
ATTCGCGACG CCAATAACGG CATTTCAGCG CTGGTGAATG CCCATGGGGA AATTATTGCG
GGCCTCGATC TTGGAGAAAC CGGCTTCGTC GATGCAACGC TCGATAGCAT CGGTGCGGGA
CTTGGAACGA CAATCCCCCG GCAAACATAC TTCTGGTTGA CCGAGGCACT GCTGATTTTG
ATTGCGCTAA TTTCTCGCAG AGGTTTTATT TCCGGGTTGA ATTGA
 
Protein sequence
MERLADRVIL VWGFKRSLLA IAAGAFAVLA LPPIGFFAAM FVSFTLLVWL IDGAAASPES 
GLIGRLWPAF ATGWLFGFGY FVAGLWWVGH ALLVDQEEFA WALPLAILGL PACLAIFYGL
AAALARIFWS DGMGRIAALA AGFGLMEWLR SVILTGFPWN AIGYGMMPVP LMMQSAHLIG
AMGVTALAVF VFSAPALAGT RQGARPGIAL AVLLFAAHLG YGAYALHLAP RPDILPEDKR
PVVRLVQPAI DQTEKMDNDV DRATIFETHL KLSAEAPKNG GRKPDIIVWP ETSIPFILTD
NQDALTRIAD TLDDNQILIA GAVRAEEMGP GTPPRYYNSI YVIDGRGQII AASDKVHLVP
FGEYLPFEDV LTEFGIQNVV EVPGGFSAAA SRHLLALPGG LNLYPLICYE IIFPGEMTGD
IKDANAILNI TNDAWFGLTP GPYQHFQQAR VRAVETGLPL IRDANNGISA LVNAHGEIIA
GLDLGETGFV DATLDSIGAG LGTTIPRQTY FWLTEALLIL IALISRRGFI SGLN