Gene Rleg_0006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_0006 
Symbolrph 
ID8015386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012850 
Strand
Start bp5172 
End bp5891 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content63% 
IMG OID644822597 
Productribonuclease PH 
Protein accessionYP_002973857 
Protein GI241202761 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0689] RNase PH 
TIGRFAM ID[TIGR01966] ribonuclease PH 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00173681 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGGCCTT CAGGCAGAAA AATCGACCAG ATGCGCAAGG TCTCGTTCGA GCGCAATTTT 
TCCAAGCATG CGGAAGGCTC CTGCCTGGTG AAGTTCGGCG ACACGCATGT GCTCTGCACG
GCGAGTCTCG AAGAAAAGAC GCCGCCATGG CTGCGCAATA CCGGCAAGGG CTGGGTCACG
GCCGAATACG GCATGCTGCC GCGGGCAACC GGCGAACGCA TGAAGCGCGA GGCTGCCGCC
GGCAAGCAGG GCGGCCGCAC CCAGGAAATC CAGCGGCTGA TCGGCCGGTC GCTGCGCGCC
GTCGTCGACC TGCAGGCGCT CGGCGAACGG CAGATCACGC TGGATTGCGA CGTCATCCAG
GCCGATGGCG GCACGCGGAC CGCCTCGATC ACCGGCGGCT GGATCGCGCT TTACGACTGC
CTGAAATGGA TGGAAAGCCG CAACATGATC AAGGTCGAAC GGGTCCTGAA GGATCATGTC
GCCGCCATCT CCTGCGGCAT CTTCGCCAGC CAGCCGGTGA TCGATCTCGA TTACATCGAA
GACTCCTCGG CCGAGACCGA TGCGAACTTC GTCATGACGG GCACCGGCGG GATCGTCGAG
ATCCAGGGCA CGGCCGAAGG CACGCCGTTC AGCGAGGGCG AATTCACCTC GCTGATGCAG
CTTGCCAGAA ACGGCATCGG CGAACTCGTG GCACTGCAGA AGCAAGCCGT CGAAGGATGA
 
Protein sequence
MRPSGRKIDQ MRKVSFERNF SKHAEGSCLV KFGDTHVLCT ASLEEKTPPW LRNTGKGWVT 
AEYGMLPRAT GERMKREAAA GKQGGRTQEI QRLIGRSLRA VVDLQALGER QITLDCDVIQ
ADGGTRTASI TGGWIALYDC LKWMESRNMI KVERVLKDHV AAISCGIFAS QPVIDLDYIE
DSSAETDANF VMTGTGGIVE IQGTAEGTPF SEGEFTSLMQ LARNGIGELV ALQKQAVEG