Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_0002 |
Symbol | |
ID | 8011254 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | + |
Start bp | 1743 |
End bp | 2825 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644822593 |
Product | Saccharopine dehydrogenase |
Protein accession | YP_002973853 |
Protein GI | 241202757 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1748] Saccharopine dehydrogenase and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.717423 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0043893 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTTTCG AAAAGATCGC CGTTCTCGGC CTGGGCAAGG TCGGACGGCT GGCGGCGACG CTGTTGCATG AAGGCGGCTT CGAGGTCATC GGCGTCGATG CGCAATTGCC GCTGAGCGAC GTCCCCTTCA AGTGCCGCAT CGGCGATATC TCCGATCCTC AAGTGATCGG CGAACTGCTC TCGAATGTCG AGGCGGTGCT GTCCTGCCTG CCCTATCATT TGAATATCGA GCTGGCGCGC GCCGCCCATC TTGCCGGCAT TCATTATTTC GATCTGACCG AAGACGTTCC GACCACCAAT TTCATCATCG AGCTGTCGAA GACAGCCCGC GGCCTGATGG CGCCGCAATG CGGCCTGGCG CCGGGTTTCG TCGGCATCAT CGGTGCAAGC CTGGCCGACG GCTTCGATCG CTGCCGGTCG ATCCGCATGC GCGTCGGCGC CCTGCCGCAG CATCCGACCG GACTGCTCGG CTACGCCTTC AACTGGTCGC CCGAGGGCGT CGTCAACGAA TATCTGAACG ACTGCGAGGT CATCGAGGGC GGTGTGCGCA AGCTTGTCTC GCCGATGGAA TGGCACGAGA CCGTCTATGT CGGCGGCGTC AAGCTCGAAG CCTTCACGAC GTCCGGCGGC CTTGGCACCA TGTGTGACAC CATGCTCGGC AAGATCGACA ATCTCGATTA CAAGACCATG CGTTATCCCG GCCATATGGA GCTGATGAAT TTCTTCTTCC ACGAGCTGTT GATGCGCGAC AAGCGCAAGC TCGCCGGCGA GATCCTGACC AATGCCAAGC CGCCGGTTGA AGACGATGTT GTCTATGTCC ATGTCGCCGC CGAAGGCACC GAGAATGGCA GCCTGCGCCG CAAGGAATTC GTGCGCGCCT ATTACCCGAT CGAGATTGCC GGCGCGCGCC GCACGGCGAT CGCCTGGACG ACGTCAGCCT CCGTCGTCGC CGTCATCGAG ATGGTCCGCG ACGGCCTGCT GCCGACGACC GGCTTCCTGC ACCAGGAGCA TATTCCGCTG GAGATGTTTT TGAAGACGCC GACCGGCAGC CTCTTCAAGG CGGGTGCGAC CAGCCACGGC TAA
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Protein sequence | MSFEKIAVLG LGKVGRLAAT LLHEGGFEVI GVDAQLPLSD VPFKCRIGDI SDPQVIGELL SNVEAVLSCL PYHLNIELAR AAHLAGIHYF DLTEDVPTTN FIIELSKTAR GLMAPQCGLA PGFVGIIGAS LADGFDRCRS IRMRVGALPQ HPTGLLGYAF NWSPEGVVNE YLNDCEVIEG GVRKLVSPME WHETVYVGGV KLEAFTTSGG LGTMCDTMLG KIDNLDYKTM RYPGHMELMN FFFHELLMRD KRKLAGEILT NAKPPVEDDV VYVHVAAEGT ENGSLRRKEF VRAYYPIEIA GARRTAIAWT TSASVVAVIE MVRDGLLPTT GFLHQEHIPL EMFLKTPTGS LFKAGATSHG
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